Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sod1P08228 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sod1P08228 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sod1P08228 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Sod1P08228 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sod1P08228 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sod1P08228 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.33■□□□□ 0.37
Sod1P08228 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Sod1P08228 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sod1P08228 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sod1P08228 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sod1P08228 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.33■□□□□ 0.37
Sod1P08228 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sod1P08228 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Sod1P08228 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.33■□□□□ 0.36
Sod1P08228 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sod1P08228 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Sod1P08228 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.33■□□□□ 0.36
Sod1P08228 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.33■□□□□ 0.36
Sod1P08228 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sod1P08228 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sod1P08228 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.33■□□□□ 0.36
Sod1P08228 Timm23-208ENSMUST00000226683 750 ntBASIC17.33■□□□□ 0.36
Sod1P08228 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sod1P08228 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sod1P08228 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sod1P08228 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sod1P08228 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Sod1P08228 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sod1P08228 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sod1P08228 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sod1P08228 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sod1P08228 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sod1P08228 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sod1P08228 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Sod1P08228 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sod1P08228 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sod1P08228 Gm13559-201ENSMUST00000120476 863 ntBASIC17.32■□□□□ 0.36
Sod1P08228 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sod1P08228 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sod1P08228 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Sod1P08228 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sod1P08228 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Sod1P08228 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sod1P08228 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sod1P08228 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sod1P08228 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sod1P08228 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sod1P08228 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Sod1P08228 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sod1P08228 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.31■□□□□ 0.36
Sod1P08228 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Sod1P08228 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.31■□□□□ 0.36
Sod1P08228 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sod1P08228 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.31■□□□□ 0.36
Sod1P08228 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.31■□□□□ 0.36
Sod1P08228 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sod1P08228 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Sod1P08228 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sod1P08228 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sod1P08228 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sod1P08228 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.3■□□□□ 0.36
Sod1P08228 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sod1P08228 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sod1P08228 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sod1P08228 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.3■□□□□ 0.36
Sod1P08228 Gm11539-201ENSMUST00000119837 557 ntBASIC17.3■□□□□ 0.36
Sod1P08228 Gm13436-201ENSMUST00000120418 567 ntBASIC17.3■□□□□ 0.36
Sod1P08228 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sod1P08228 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sod1P08228 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.3■□□□□ 0.36
Sod1P08228 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sod1P08228 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sod1P08228 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Sod1P08228 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sod1P08228 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.29■□□□□ 0.36
Sod1P08228 Mir2861-201ENSMUST00000175539 82 ntBASIC17.29■□□□□ 0.36
Sod1P08228 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sod1P08228 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sod1P08228 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sod1P08228 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sod1P08228 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sod1P08228 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sod1P08228 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Sod1P08228 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Sod1P08228 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sod1P08228 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sod1P08228 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sod1P08228 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.28■□□□□ 0.36
Sod1P08228 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sod1P08228 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Sod1P08228 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Sod1P08228 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.28■□□□□ 0.36
Sod1P08228 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sod1P08228 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sod1P08228 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sod1P08228 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sod1P08228 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sod1P08228 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Sod1P08228 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms