Protein–RNA interactions for Protein: P04235

Cd3d, T-cell surface glycoprotein CD3 delta chain, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd3dP04235 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cd3dP04235 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cd3dP04235 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cd3dP04235 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cd3dP04235 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cd3dP04235 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cd3dP04235 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cd3dP04235 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Cd3dP04235 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Cd3dP04235 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cd3dP04235 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cd3dP04235 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cd3dP04235 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
Cd3dP04235 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cd3dP04235 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cd3dP04235 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cd3dP04235 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cd3dP04235 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Cd3dP04235 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.38■■□□□ 1.01
Cd3dP04235 Gm27275-201ENSMUST00000184318 272 ntBASIC21.38■■□□□ 1.01
Cd3dP04235 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cd3dP04235 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cd3dP04235 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.38■■□□□ 1.01
Cd3dP04235 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
Cd3dP04235 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cd3dP04235 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.37■■□□□ 1.01
Cd3dP04235 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.37■■□□□ 1.01
Cd3dP04235 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.37■■□□□ 1.01
Cd3dP04235 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.37■■□□□ 1.01
Cd3dP04235 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cd3dP04235 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cd3dP04235 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Cd3dP04235 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cd3dP04235 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cd3dP04235 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.36■■□□□ 1.01
Cd3dP04235 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cd3dP04235 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cd3dP04235 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cd3dP04235 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cd3dP04235 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Cd3dP04235 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.36■■□□□ 1.01
Cd3dP04235 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.36■■□□□ 1.01
Cd3dP04235 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cd3dP04235 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cd3dP04235 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cd3dP04235 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cd3dP04235 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Cd3dP04235 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cd3dP04235 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cd3dP04235 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cd3dP04235 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cd3dP04235 Flg-201ENSMUST00000050758 1488 ntBASIC21.35■■□□□ 1.01
Cd3dP04235 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cd3dP04235 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cd3dP04235 Gm11249-201ENSMUST00000117071 859 ntBASIC21.35■■□□□ 1.01
Cd3dP04235 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cd3dP04235 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cd3dP04235 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cd3dP04235 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cd3dP04235 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cd3dP04235 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cd3dP04235 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cd3dP04235 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cd3dP04235 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cd3dP04235 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.34■■□□□ 1.01
Cd3dP04235 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Cd3dP04235 Gm20760-201ENSMUST00000179197 648 ntBASIC21.34■■□□□ 1.01
Cd3dP04235 Trmt13-210ENSMUST00000198454 880 ntBASIC21.34■■□□□ 1.01
Cd3dP04235 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.34■■□□□ 1.01
Cd3dP04235 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Cd3dP04235 Zfp783-201ENSMUST00000095946 670 ntBASIC21.34■■□□□ 1.01
Cd3dP04235 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Cd3dP04235 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cd3dP04235 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.34■■□□□ 1.01
Cd3dP04235 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cd3dP04235 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cd3dP04235 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cd3dP04235 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cd3dP04235 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cd3dP04235 Gm11927-201ENSMUST00000118472 759 ntBASIC21.33■■□□□ 1.01
Cd3dP04235 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cd3dP04235 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Cd3dP04235 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cd3dP04235 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cd3dP04235 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1
Cd3dP04235 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cd3dP04235 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.32■■□□□ 1
Cd3dP04235 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cd3dP04235 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cd3dP04235 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Cd3dP04235 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.31■■□□□ 1
Cd3dP04235 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.31■■□□□ 1
Cd3dP04235 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Cd3dP04235 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cd3dP04235 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Cd3dP04235 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.31■■□□□ 1
Cd3dP04235 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.3■■□□□ 1
Cd3dP04235 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.3■■□□□ 1
Cd3dP04235 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Cd3dP04235 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms