Protein–RNA interactions for Protein: P01810

Ig heavy chain V region J539, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01810 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P01810 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
P01810 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P01810 Dio3-201ENSMUST00000097228 1449 ntBASIC18.4■□□□□ 0.54
P01810 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
P01810 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
P01810 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
P01810 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
P01810 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P01810 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
P01810 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P01810 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.39■□□□□ 0.53
P01810 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
P01810 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
P01810 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.39■□□□□ 0.53
P01810 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.39■□□□□ 0.53
P01810 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
P01810 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P01810 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.39■□□□□ 0.53
P01810 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.39■□□□□ 0.53
P01810 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
P01810 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.39■□□□□ 0.53
P01810 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
P01810 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.38■□□□□ 0.53
P01810 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01810 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.38■□□□□ 0.53
P01810 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01810 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01810 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
P01810 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01810 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01810 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01810 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01810 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
P01810 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01810 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.37■□□□□ 0.53
P01810 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01810 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01810 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.37■□□□□ 0.53
P01810 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.37■□□□□ 0.53
P01810 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.37■□□□□ 0.53
P01810 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
P01810 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.37■□□□□ 0.53
P01810 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.37■□□□□ 0.53
P01810 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
P01810 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01810 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
P01810 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P01810 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
P01810 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
P01810 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.36■□□□□ 0.53
P01810 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P01810 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P01810 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
P01810 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01810 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
P01810 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01810 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01810 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01810 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.35■□□□□ 0.53
P01810 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.35■□□□□ 0.53
P01810 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01810 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01810 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
P01810 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01810 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
P01810 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
P01810 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01810 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
P01810 Gm11249-201ENSMUST00000117071 859 ntBASIC18.34■□□□□ 0.53
P01810 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
P01810 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.34■□□□□ 0.53
P01810 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01810 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01810 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01810 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01810 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01810 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01810 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01810 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
P01810 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
P01810 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
P01810 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
P01810 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.33■□□□□ 0.53
P01810 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.33■□□□□ 0.53
P01810 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
P01810 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
P01810 Trmt13-210ENSMUST00000198454 880 ntBASIC18.33■□□□□ 0.52
P01810 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.33■□□□□ 0.52
P01810 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
P01810 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
P01810 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
P01810 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
P01810 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
P01810 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
P01810 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
P01810 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
P01810 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
P01810 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P01810 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms