Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ShdO88834 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ShdO88834 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ShdO88834 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
ShdO88834 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ShdO88834 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ShdO88834 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.7■□□□□ 0.58
ShdO88834 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ShdO88834 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ShdO88834 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ShdO88834 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ShdO88834 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.7■□□□□ 0.58
ShdO88834 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ShdO88834 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ShdO88834 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ShdO88834 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.7■□□□□ 0.58
ShdO88834 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ShdO88834 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ShdO88834 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ShdO88834 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.7■□□□□ 0.58
ShdO88834 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ShdO88834 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ShdO88834 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ShdO88834 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ShdO88834 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ShdO88834 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
ShdO88834 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ShdO88834 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ShdO88834 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.69■□□□□ 0.58
ShdO88834 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.69■□□□□ 0.58
ShdO88834 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.69■□□□□ 0.58
ShdO88834 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.69■□□□□ 0.58
ShdO88834 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ShdO88834 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ShdO88834 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
ShdO88834 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ShdO88834 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ShdO88834 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ShdO88834 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ShdO88834 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ShdO88834 Fst-202ENSMUST00000223640 2612 ntBASIC18.68■□□□□ 0.58
ShdO88834 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.68■□□□□ 0.58
ShdO88834 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ShdO88834 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ShdO88834 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ShdO88834 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.68■□□□□ 0.58
ShdO88834 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ShdO88834 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ShdO88834 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.68■□□□□ 0.58
ShdO88834 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ShdO88834 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
ShdO88834 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ShdO88834 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ShdO88834 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ShdO88834 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ShdO88834 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.67■□□□□ 0.58
ShdO88834 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ShdO88834 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ShdO88834 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ShdO88834 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ShdO88834 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ShdO88834 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ShdO88834 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ShdO88834 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ShdO88834 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ShdO88834 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
ShdO88834 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ShdO88834 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ShdO88834 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ShdO88834 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ShdO88834 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
ShdO88834 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ShdO88834 Grk6-206ENSMUST00000224995 2971 ntBASIC18.66■□□□□ 0.58
ShdO88834 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.66■□□□□ 0.58
ShdO88834 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ShdO88834 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ShdO88834 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ShdO88834 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.66■□□□□ 0.58
ShdO88834 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
ShdO88834 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ShdO88834 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.66■□□□□ 0.58
ShdO88834 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ShdO88834 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ShdO88834 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ShdO88834 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.66■□□□□ 0.58
ShdO88834 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ShdO88834 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.66■□□□□ 0.58
ShdO88834 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ShdO88834 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ShdO88834 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ShdO88834 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.66■□□□□ 0.58
ShdO88834 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ShdO88834 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.66■□□□□ 0.58
ShdO88834 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ShdO88834 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ShdO88834 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ShdO88834 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ShdO88834 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.65■□□□□ 0.58
ShdO88834 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.65■□□□□ 0.58
ShdO88834 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms