Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.35■□□□□ 0.37
Rdh5O55240 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rdh5O55240 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.35■□□□□ 0.37
Rdh5O55240 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rdh5O55240 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rdh5O55240 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rdh5O55240 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rdh5O55240 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rdh5O55240 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.35■□□□□ 0.37
Rdh5O55240 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rdh5O55240 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rdh5O55240 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rdh5O55240 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rdh5O55240 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rdh5O55240 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Rdh5O55240 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.34■□□□□ 0.37
Rdh5O55240 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.34■□□□□ 0.37
Rdh5O55240 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rdh5O55240 Gm10602-201ENSMUST00000098239 609 ntBASIC17.34■□□□□ 0.37
Rdh5O55240 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rdh5O55240 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rdh5O55240 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rdh5O55240 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.33■□□□□ 0.37
Rdh5O55240 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rdh5O55240 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rdh5O55240 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Rdh5O55240 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rdh5O55240 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rdh5O55240 Gm12933-201ENSMUST00000120203 872 ntBASIC17.33■□□□□ 0.36
Rdh5O55240 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rdh5O55240 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rdh5O55240 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Rdh5O55240 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rdh5O55240 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Rdh5O55240 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rdh5O55240 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
Rdh5O55240 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rdh5O55240 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rdh5O55240 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rdh5O55240 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rdh5O55240 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rdh5O55240 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rdh5O55240 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rdh5O55240 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Rdh5O55240 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.32■□□□□ 0.36
Rdh5O55240 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rdh5O55240 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rdh5O55240 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rdh5O55240 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rdh5O55240 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh5O55240 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh5O55240 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh5O55240 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh5O55240 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.31■□□□□ 0.36
Rdh5O55240 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh5O55240 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rdh5O55240 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
Rdh5O55240 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.31■□□□□ 0.36
Rdh5O55240 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.31■□□□□ 0.36
Rdh5O55240 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh5O55240 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh5O55240 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rdh5O55240 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh5O55240 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh5O55240 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh5O55240 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh5O55240 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh5O55240 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh5O55240 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh5O55240 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh5O55240 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.31■□□□□ 0.36
Rdh5O55240 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rdh5O55240 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh5O55240 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh5O55240 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh5O55240 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Rdh5O55240 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh5O55240 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.3■□□□□ 0.36
Rdh5O55240 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.3■□□□□ 0.36
Rdh5O55240 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.3■□□□□ 0.36
Rdh5O55240 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh5O55240 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh5O55240 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh5O55240 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh5O55240 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Rdh5O55240 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh5O55240 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh5O55240 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh5O55240 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Rdh5O55240 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh5O55240 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.29■□□□□ 0.36
Rdh5O55240 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh5O55240 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh5O55240 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh5O55240 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.29■□□□□ 0.36
Rdh5O55240 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rdh5O55240 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh5O55240 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh5O55240 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh5O55240 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms