Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Phox2bO35690 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Phox2bO35690 Gm7860-201ENSMUST00000121190 879 ntBASIC18.33■□□□□ 0.52
Phox2bO35690 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Phox2bO35690 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Phox2bO35690 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Phox2bO35690 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Phox2bO35690 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Phox2bO35690 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Phox2bO35690 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Phox2bO35690 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Phox2bO35690 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Phox2bO35690 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Phox2bO35690 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Phox2bO35690 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Phox2bO35690 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Phox2bO35690 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Phox2bO35690 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Phox2bO35690 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Phox2bO35690 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Phox2bO35690 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.32■□□□□ 0.52
Phox2bO35690 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Phox2bO35690 AC153937.1-201ENSMUST00000218734 412 ntBASIC18.32■□□□□ 0.52
Phox2bO35690 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Phox2bO35690 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Phox2bO35690 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Phox2bO35690 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.32■□□□□ 0.52
Phox2bO35690 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Phox2bO35690 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.31■□□□□ 0.52
Phox2bO35690 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Phox2bO35690 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Phox2bO35690 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
Phox2bO35690 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Phox2bO35690 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Phox2bO35690 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.31■□□□□ 0.52
Phox2bO35690 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Phox2bO35690 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Phox2bO35690 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.31■□□□□ 0.52
Phox2bO35690 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Phox2bO35690 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Phox2bO35690 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
Phox2bO35690 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Phox2bO35690 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Phox2bO35690 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Phox2bO35690 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.3■□□□□ 0.52
Phox2bO35690 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.3■□□□□ 0.52
Phox2bO35690 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Phox2bO35690 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Phox2bO35690 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Phox2bO35690 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Phox2bO35690 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Phox2bO35690 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Phox2bO35690 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Phox2bO35690 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Phox2bO35690 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Phox2bO35690 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Phox2bO35690 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Phox2bO35690 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.29■□□□□ 0.52
Phox2bO35690 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.29■□□□□ 0.52
Phox2bO35690 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Phox2bO35690 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Phox2bO35690 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Phox2bO35690 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.29■□□□□ 0.52
Phox2bO35690 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Phox2bO35690 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Phox2bO35690 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Phox2bO35690 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Phox2bO35690 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.28■□□□□ 0.52
Phox2bO35690 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Phox2bO35690 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Phox2bO35690 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Phox2bO35690 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Phox2bO35690 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Phox2bO35690 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Phox2bO35690 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Phox2bO35690 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Phox2bO35690 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Phox2bO35690 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Phox2bO35690 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.28■□□□□ 0.52
Phox2bO35690 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.28■□□□□ 0.52
Phox2bO35690 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.28■□□□□ 0.52
Phox2bO35690 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Phox2bO35690 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Phox2bO35690 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Phox2bO35690 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Phox2bO35690 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Phox2bO35690 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Phox2bO35690 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.27■□□□□ 0.52
Phox2bO35690 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Phox2bO35690 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.27■□□□□ 0.52
Phox2bO35690 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Phox2bO35690 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Phox2bO35690 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Phox2bO35690 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Phox2bO35690 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Phox2bO35690 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Phox2bO35690 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Phox2bO35690 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Phox2bO35690 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Phox2bO35690 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms