Protein–RNA interactions for Protein: O35652

Lhx8, LIM/homeobox protein Lhx8, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx8O35652 Gm37319-201ENSMUST00000193500 636 ntBASIC17.7■□□□□ 0.42
Lhx8O35652 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx8O35652 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx8O35652 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx8O35652 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx8O35652 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx8O35652 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.7■□□□□ 0.42
Lhx8O35652 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx8O35652 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx8O35652 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.7■□□□□ 0.42
Lhx8O35652 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx8O35652 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx8O35652 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx8O35652 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx8O35652 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Lhx8O35652 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx8O35652 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.69■□□□□ 0.42
Lhx8O35652 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx8O35652 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx8O35652 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx8O35652 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.69■□□□□ 0.42
Lhx8O35652 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx8O35652 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx8O35652 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx8O35652 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx8O35652 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx8O35652 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.69■□□□□ 0.42
Lhx8O35652 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.69■□□□□ 0.42
Lhx8O35652 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx8O35652 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx8O35652 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx8O35652 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.68■□□□□ 0.42
Lhx8O35652 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.68■□□□□ 0.42
Lhx8O35652 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Lhx8O35652 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx8O35652 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx8O35652 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx8O35652 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Lhx8O35652 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Lhx8O35652 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Lhx8O35652 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx8O35652 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx8O35652 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Lhx8O35652 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.67■□□□□ 0.42
Lhx8O35652 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Lhx8O35652 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Lhx8O35652 Gm9988-201ENSMUST00000069786 435 ntBASIC17.67■□□□□ 0.42
Lhx8O35652 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.67■□□□□ 0.42
Lhx8O35652 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx8O35652 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx8O35652 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.67■□□□□ 0.42
Lhx8O35652 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx8O35652 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx8O35652 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx8O35652 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx8O35652 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx8O35652 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx8O35652 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx8O35652 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Lhx8O35652 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.66■□□□□ 0.42
Lhx8O35652 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx8O35652 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx8O35652 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx8O35652 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.66■□□□□ 0.42
Lhx8O35652 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx8O35652 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx8O35652 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx8O35652 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx8O35652 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx8O35652 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Lhx8O35652 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx8O35652 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Lhx8O35652 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx8O35652 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.65■□□□□ 0.42
Lhx8O35652 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx8O35652 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx8O35652 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx8O35652 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.65■□□□□ 0.42
Lhx8O35652 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx8O35652 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx8O35652 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx8O35652 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx8O35652 Gm12849-201ENSMUST00000120013 739 ntBASIC17.65■□□□□ 0.42
Lhx8O35652 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx8O35652 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.65■□□□□ 0.42
Lhx8O35652 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Lhx8O35652 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.65■□□□□ 0.42
Lhx8O35652 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx8O35652 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx8O35652 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Lhx8O35652 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Lhx8O35652 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx8O35652 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx8O35652 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Lhx8O35652 Gm28745-201ENSMUST00000190069 305 ntBASIC17.64■□□□□ 0.41
Lhx8O35652 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx8O35652 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.64■□□□□ 0.41
Lhx8O35652 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.64■□□□□ 0.41
Lhx8O35652 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx8O35652 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms