Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm3543D3Z235 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm3543D3Z235 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Gm3543D3Z235 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm3543D3Z235 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm3543D3Z235 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.53■□□□□ 0.24
Gm3543D3Z235 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Gm3543D3Z235 Gm6211-202ENSMUST00000167849 925 ntBASIC16.53■□□□□ 0.24
Gm3543D3Z235 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm3543D3Z235 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.53■□□□□ 0.24
Gm3543D3Z235 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm3543D3Z235 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm3543D3Z235 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm3543D3Z235 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm3543D3Z235 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm3543D3Z235 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Gm3543D3Z235 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
Gm3543D3Z235 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm3543D3Z235 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Gm3543D3Z235 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm3543D3Z235 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.52■□□□□ 0.24
Gm3543D3Z235 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.52■□□□□ 0.24
Gm3543D3Z235 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.52■□□□□ 0.24
Gm3543D3Z235 Gm5408-201ENSMUST00000197998 747 ntBASIC16.52■□□□□ 0.24
Gm3543D3Z235 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm3543D3Z235 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Gm3543D3Z235 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Gm3543D3Z235 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Gm3543D3Z235 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Gm3543D3Z235 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3543D3Z235 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3543D3Z235 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.51■□□□□ 0.23
Gm3543D3Z235 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3543D3Z235 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3543D3Z235 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Gm3543D3Z235 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Gm3543D3Z235 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.51■□□□□ 0.23
Gm3543D3Z235 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3543D3Z235 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Gm3543D3Z235 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3543D3Z235 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3543D3Z235 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3543D3Z235 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.51■□□□□ 0.23
Gm3543D3Z235 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3543D3Z235 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.51■□□□□ 0.23
Gm3543D3Z235 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3543D3Z235 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3543D3Z235 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Gm3543D3Z235 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3543D3Z235 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3543D3Z235 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3543D3Z235 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Gm3543D3Z235 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3543D3Z235 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3543D3Z235 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3543D3Z235 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm3543D3Z235 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Gm3543D3Z235 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm3543D3Z235 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Gm3543D3Z235 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm3543D3Z235 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm3543D3Z235 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Gm3543D3Z235 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Gm3543D3Z235 Gm13148-201ENSMUST00000118892 745 ntBASIC16.5■□□□□ 0.23
Gm3543D3Z235 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.5■□□□□ 0.23
Gm3543D3Z235 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Gm3543D3Z235 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.5■□□□□ 0.23
Gm3543D3Z235 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm3543D3Z235 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm3543D3Z235 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm3543D3Z235 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Gm3543D3Z235 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Gm3543D3Z235 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Gm3543D3Z235 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm3543D3Z235 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm3543D3Z235 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Gm3543D3Z235 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm3543D3Z235 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm3543D3Z235 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm3543D3Z235 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm3543D3Z235 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm3543D3Z235 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Gm3543D3Z235 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Gm3543D3Z235 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm3543D3Z235 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.49■□□□□ 0.23
Gm3543D3Z235 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Gm3543D3Z235 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Gm3543D3Z235 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.49■□□□□ 0.23
Gm3543D3Z235 Gm4968-201ENSMUST00000071458 858 ntBASIC16.49■□□□□ 0.23
Gm3543D3Z235 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Gm3543D3Z235 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm3543D3Z235 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm3543D3Z235 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm3543D3Z235 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm3543D3Z235 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm3543D3Z235 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Gm3543D3Z235 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm3543D3Z235 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.48■□□□□ 0.23
Gm3543D3Z235 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm3543D3Z235 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms