Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a6B1AVK5 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a6B1AVK5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Col4a6B1AVK5 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Col4a6B1AVK5 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a6B1AVK5 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a6B1AVK5 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Col4a6B1AVK5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a6B1AVK5 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a6B1AVK5 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a6B1AVK5 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Col4a6B1AVK5 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a6B1AVK5 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.07■□□□□ 0.64
Col4a6B1AVK5 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a6B1AVK5 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Col4a6B1AVK5 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a6B1AVK5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a6B1AVK5 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.06■□□□□ 0.64
Col4a6B1AVK5 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.06■□□□□ 0.64
Col4a6B1AVK5 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.06■□□□□ 0.64
Col4a6B1AVK5 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a6B1AVK5 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Col4a6B1AVK5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a6B1AVK5 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a6B1AVK5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a6B1AVK5 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a6B1AVK5 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.05■□□□□ 0.64
Col4a6B1AVK5 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a6B1AVK5 Gm18959-201ENSMUST00000208954 655 ntBASIC19.05■□□□□ 0.64
Col4a6B1AVK5 Gm7367-201ENSMUST00000057611 492 ntBASIC19.05■□□□□ 0.64
Col4a6B1AVK5 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a6B1AVK5 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.05■□□□□ 0.64
Col4a6B1AVK5 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a6B1AVK5 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a6B1AVK5 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Col4a6B1AVK5 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.04■□□□□ 0.64
Col4a6B1AVK5 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a6B1AVK5 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a6B1AVK5 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Col4a6B1AVK5 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.04■□□□□ 0.64
Col4a6B1AVK5 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a6B1AVK5 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.04■□□□□ 0.64
Col4a6B1AVK5 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.04■□□□□ 0.64
Col4a6B1AVK5 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a6B1AVK5 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a6B1AVK5 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a6B1AVK5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a6B1AVK5 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a6B1AVK5 Gm6345-202ENSMUST00000180900 204 ntBASIC19.03■□□□□ 0.64
Col4a6B1AVK5 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a6B1AVK5 Gm23634-201ENSMUST00000175071 91 ntBASIC19.02■□□□□ 0.64
Col4a6B1AVK5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col4a6B1AVK5 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col4a6B1AVK5 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col4a6B1AVK5 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.02■□□□□ 0.64
Col4a6B1AVK5 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col4a6B1AVK5 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.02■□□□□ 0.64
Col4a6B1AVK5 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col4a6B1AVK5 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a6B1AVK5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a6B1AVK5 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Col4a6B1AVK5 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a6B1AVK5 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a6B1AVK5 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a6B1AVK5 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a6B1AVK5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a6B1AVK5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a6B1AVK5 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
Col4a6B1AVK5 Gm10013-201ENSMUST00000106074 672 ntBASIC19.01■□□□□ 0.63
Col4a6B1AVK5 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a6B1AVK5 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a6B1AVK5 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19■□□□□ 0.63
Col4a6B1AVK5 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a6B1AVK5 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a6B1AVK5 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a6B1AVK5 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a6B1AVK5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Col4a6B1AVK5 Gm12085-201ENSMUST00000119263 940 ntBASIC19■□□□□ 0.63
Col4a6B1AVK5 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a6B1AVK5 Gm6728-201ENSMUST00000178117 1065 ntBASIC19■□□□□ 0.63
Col4a6B1AVK5 Gm10517-202ENSMUST00000192970 758 ntBASIC19■□□□□ 0.63
Col4a6B1AVK5 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a6B1AVK5 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a6B1AVK5 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a6B1AVK5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a6B1AVK5 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a6B1AVK5 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a6B1AVK5 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Col4a6B1AVK5 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.99■□□□□ 0.63
Col4a6B1AVK5 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.99■□□□□ 0.63
Col4a6B1AVK5 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Col4a6B1AVK5 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a6B1AVK5 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a6B1AVK5 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a6B1AVK5 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a6B1AVK5 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a6B1AVK5 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a6B1AVK5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.98■□□□□ 0.63
Col4a6B1AVK5 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a6B1AVK5 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms