Protein–RNA interactions for Protein: A6H6S0

Herc3, Hect domain and RLD 3, mousemouse

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc3A6H6S0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Herc3A6H6S0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Herc3A6H6S0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Herc3A6H6S0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Herc3A6H6S0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Herc3A6H6S0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Herc3A6H6S0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Herc3A6H6S0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Herc3A6H6S0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Herc3A6H6S0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Herc3A6H6S0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Herc3A6H6S0 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.25■□□□□ 0.83
Herc3A6H6S0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Herc3A6H6S0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Herc3A6H6S0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.25■□□□□ 0.83
Herc3A6H6S0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.25■□□□□ 0.83
Herc3A6H6S0 Gm8495-201ENSMUST00000188740 694 ntBASIC20.25■□□□□ 0.83
Herc3A6H6S0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.25■□□□□ 0.83
Herc3A6H6S0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Herc3A6H6S0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Herc3A6H6S0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Herc3A6H6S0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Herc3A6H6S0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Herc3A6H6S0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Herc3A6H6S0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Herc3A6H6S0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Herc3A6H6S0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Herc3A6H6S0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Herc3A6H6S0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Herc3A6H6S0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Herc3A6H6S0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Herc3A6H6S0 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.24■□□□□ 0.83
Herc3A6H6S0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Herc3A6H6S0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Herc3A6H6S0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Herc3A6H6S0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Herc3A6H6S0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Herc3A6H6S0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Herc3A6H6S0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Herc3A6H6S0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.23■□□□□ 0.83
Herc3A6H6S0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Herc3A6H6S0 Fst-202ENSMUST00000223640 2612 ntBASIC20.23■□□□□ 0.83
Herc3A6H6S0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Herc3A6H6S0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Herc3A6H6S0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Herc3A6H6S0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Herc3A6H6S0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Herc3A6H6S0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Herc3A6H6S0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Herc3A6H6S0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Herc3A6H6S0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Herc3A6H6S0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Herc3A6H6S0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Herc3A6H6S0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Herc3A6H6S0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Herc3A6H6S0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Herc3A6H6S0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Herc3A6H6S0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.21■□□□□ 0.83
Herc3A6H6S0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Herc3A6H6S0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.21■□□□□ 0.83
Herc3A6H6S0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.21■□□□□ 0.83
Herc3A6H6S0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.21■□□□□ 0.83
Herc3A6H6S0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.21■□□□□ 0.83
Herc3A6H6S0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.21■□□□□ 0.83
Herc3A6H6S0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Herc3A6H6S0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Herc3A6H6S0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Herc3A6H6S0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Herc3A6H6S0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Herc3A6H6S0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Herc3A6H6S0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
Herc3A6H6S0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Herc3A6H6S0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Herc3A6H6S0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Herc3A6H6S0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Herc3A6H6S0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Herc3A6H6S0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Herc3A6H6S0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Herc3A6H6S0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Herc3A6H6S0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Herc3A6H6S0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Herc3A6H6S0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Herc3A6H6S0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Herc3A6H6S0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.2■□□□□ 0.82
Herc3A6H6S0 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.2■□□□□ 0.82
Herc3A6H6S0 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.2■□□□□ 0.82
Herc3A6H6S0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Herc3A6H6S0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Herc3A6H6S0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Herc3A6H6S0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Herc3A6H6S0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Herc3A6H6S0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.19■□□□□ 0.82
Herc3A6H6S0 Gm42569-201ENSMUST00000200539 472 ntBASIC20.19■□□□□ 0.82
Herc3A6H6S0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Herc3A6H6S0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Herc3A6H6S0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.19■□□□□ 0.82
Herc3A6H6S0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Herc3A6H6S0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Herc3A6H6S0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Herc3A6H6S0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms