Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scn1aA2APX8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scn1aA2APX8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scn1aA2APX8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.3■□□□□ 0.68
Scn1aA2APX8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn1aA2APX8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scn1aA2APX8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn1aA2APX8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn1aA2APX8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Scn1aA2APX8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Scn1aA2APX8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn1aA2APX8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.29■□□□□ 0.68
Scn1aA2APX8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Scn1aA2APX8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scn1aA2APX8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scn1aA2APX8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.29■□□□□ 0.68
Scn1aA2APX8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn1aA2APX8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Scn1aA2APX8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Scn1aA2APX8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn1aA2APX8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scn1aA2APX8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.28■□□□□ 0.68
Scn1aA2APX8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn1aA2APX8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scn1aA2APX8 Flg-201ENSMUST00000050758 1488 ntBASIC19.28■□□□□ 0.68
Scn1aA2APX8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn1aA2APX8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Scn1aA2APX8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn1aA2APX8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.28■□□□□ 0.68
Scn1aA2APX8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.28■□□□□ 0.68
Scn1aA2APX8 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Scn1aA2APX8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scn1aA2APX8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scn1aA2APX8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scn1aA2APX8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scn1aA2APX8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Scn1aA2APX8 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.27■□□□□ 0.68
Scn1aA2APX8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.27■□□□□ 0.68
Scn1aA2APX8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn1aA2APX8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.27■□□□□ 0.67
Scn1aA2APX8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scn1aA2APX8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.27■□□□□ 0.67
Scn1aA2APX8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scn1aA2APX8 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scn1aA2APX8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scn1aA2APX8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scn1aA2APX8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scn1aA2APX8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn1aA2APX8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.26■□□□□ 0.67
Scn1aA2APX8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.26■□□□□ 0.67
Scn1aA2APX8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn1aA2APX8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn1aA2APX8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Scn1aA2APX8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn1aA2APX8 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.26■□□□□ 0.67
Scn1aA2APX8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn1aA2APX8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
Scn1aA2APX8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Scn1aA2APX8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn1aA2APX8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scn1aA2APX8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn1aA2APX8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn1aA2APX8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scn1aA2APX8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Scn1aA2APX8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Scn1aA2APX8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn1aA2APX8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scn1aA2APX8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn1aA2APX8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn1aA2APX8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Scn1aA2APX8 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.24■□□□□ 0.67
Scn1aA2APX8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Scn1aA2APX8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Scn1aA2APX8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scn1aA2APX8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scn1aA2APX8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.24■□□□□ 0.67
Scn1aA2APX8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Scn1aA2APX8 Gm38285-201ENSMUST00000192928 922 ntBASIC19.24■□□□□ 0.67
Scn1aA2APX8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
Scn1aA2APX8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn1aA2APX8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn1aA2APX8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn1aA2APX8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn1aA2APX8 Gm10812-201ENSMUST00000099864 546 ntBASIC19.24■□□□□ 0.67
Scn1aA2APX8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scn1aA2APX8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn1aA2APX8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn1aA2APX8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn1aA2APX8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn1aA2APX8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn1aA2APX8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.23■□□□□ 0.67
Scn1aA2APX8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn1aA2APX8 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.23■□□□□ 0.67
Scn1aA2APX8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn1aA2APX8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scn1aA2APX8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Scn1aA2APX8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn1aA2APX8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn1aA2APX8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.22■□□□□ 0.67
Scn1aA2APX8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms