Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav11A0A0B4J1J9 Gm37811-201ENSMUST00000192416 2601 ntBASIC12.59□□□□□ -0.39
Trav11A0A0B4J1J9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav11A0A0B4J1J9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav11A0A0B4J1J9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav11A0A0B4J1J9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav11A0A0B4J1J9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav11A0A0B4J1J9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav11A0A0B4J1J9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav11A0A0B4J1J9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav11A0A0B4J1J9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav11A0A0B4J1J9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav11A0A0B4J1J9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Trav11A0A0B4J1J9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav11A0A0B4J1J9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav11A0A0B4J1J9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav11A0A0B4J1J9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav11A0A0B4J1J9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav11A0A0B4J1J9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav11A0A0B4J1J9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav11A0A0B4J1J9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav11A0A0B4J1J9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav11A0A0B4J1J9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav11A0A0B4J1J9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Trav11A0A0B4J1J9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav11A0A0B4J1J9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav11A0A0B4J1J9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav11A0A0B4J1J9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav11A0A0B4J1J9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav11A0A0B4J1J9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav11A0A0B4J1J9 Gm9207-201ENSMUST00000198773 1115 ntBASIC12.58□□□□□ -0.4
Trav11A0A0B4J1J9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC12.58□□□□□ -0.4
Trav11A0A0B4J1J9 Golgb1-201ENSMUST00000023534 498 ntBASIC12.58□□□□□ -0.4
Trav11A0A0B4J1J9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav11A0A0B4J1J9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav11A0A0B4J1J9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav11A0A0B4J1J9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav11A0A0B4J1J9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav11A0A0B4J1J9 Gm43213-201ENSMUST00000151866 1790 ntBASIC12.58□□□□□ -0.4
Trav11A0A0B4J1J9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav11A0A0B4J1J9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav11A0A0B4J1J9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav11A0A0B4J1J9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav11A0A0B4J1J9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav11A0A0B4J1J9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav11A0A0B4J1J9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav11A0A0B4J1J9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav11A0A0B4J1J9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav11A0A0B4J1J9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Trav11A0A0B4J1J9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
Trav11A0A0B4J1J9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav11A0A0B4J1J9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav11A0A0B4J1J9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trav11A0A0B4J1J9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC12.57□□□□□ -0.4
Trav11A0A0B4J1J9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav11A0A0B4J1J9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC12.57□□□□□ -0.4
Trav11A0A0B4J1J9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav11A0A0B4J1J9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav11A0A0B4J1J9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav11A0A0B4J1J9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav11A0A0B4J1J9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav11A0A0B4J1J9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC12.57□□□□□ -0.4
Trav11A0A0B4J1J9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Trav11A0A0B4J1J9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav11A0A0B4J1J9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav11A0A0B4J1J9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav11A0A0B4J1J9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav11A0A0B4J1J9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav11A0A0B4J1J9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav11A0A0B4J1J9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms