Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.22■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Gm4968-201ENSMUST00000071458 858 ntBASIC16.22■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.22■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Gm5408-201ENSMUST00000197998 747 ntBASIC16.21■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.21■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Tgds-204ENSMUST00000228543 1594 ntBASIC16.21■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.21■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Gm2399-201ENSMUST00000104944 225 ntBASIC16.2■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.2■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv12-1A0A0B4J1H0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.2■□□□□ 0.18
Trbv12-1A0A0B4J1H0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.19■□□□□ 0.18
Trbv12-1A0A0B4J1H0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.19■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv12-1A0A0B4J1H0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.19■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.18■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.18■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.18■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.18■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.18■□□□□ 0.18
Trbv12-1A0A0B4J1H0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv12-1A0A0B4J1H0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.17■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv12-1A0A0B4J1H0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trbv12-1A0A0B4J1H0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Gm38285-201ENSMUST00000192928 922 ntBASIC16.16■□□□□ 0.18
Trbv12-1A0A0B4J1H0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms