Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Gm27801-201ENSMUST00000184174 223 ntBASIC17.38■□□□□ 0.37
Sirpb1aA0A0A6YYP6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.38■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.38■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.37■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sirpb1aA0A0A6YYP6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.37■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Sirpb1aA0A0A6YYP6 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.36■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Smad6-203ENSMUST00000179458 273 ntBASIC17.36■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.36■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.35■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.35■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.35■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.35■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.34■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.34■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.34■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.34■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sirpb1aA0A0A6YYP6 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sirpb1aA0A0A6YYP6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.33■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms