Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6n-5A0A075B621 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6n-5A0A075B621 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6n-5A0A075B621 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6n-5A0A075B621 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav6n-5A0A075B621 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav6n-5A0A075B621 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6n-5A0A075B621 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6n-5A0A075B621 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6n-5A0A075B621 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6n-5A0A075B621 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6n-5A0A075B621 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6n-5A0A075B621 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6n-5A0A075B621 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6n-5A0A075B621 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6n-5A0A075B621 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6n-5A0A075B621 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6n-5A0A075B621 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav6n-5A0A075B621 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav6n-5A0A075B621 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6n-5A0A075B621 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6n-5A0A075B621 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6n-5A0A075B621 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6n-5A0A075B621 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6n-5A0A075B621 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6n-5A0A075B621 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav6n-5A0A075B621 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6n-5A0A075B621 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav6n-5A0A075B621 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav6n-5A0A075B621 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6n-5A0A075B621 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6n-5A0A075B621 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6n-5A0A075B621 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trav6n-5A0A075B621 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6n-5A0A075B621 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6n-5A0A075B621 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6n-5A0A075B621 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.22□□□□□ -0.13
Trav6n-5A0A075B621 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6n-5A0A075B621 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6n-5A0A075B621 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trav6n-5A0A075B621 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav6n-5A0A075B621 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6n-5A0A075B621 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6n-5A0A075B621 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6n-5A0A075B621 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6n-5A0A075B621 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6n-5A0A075B621 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6n-5A0A075B621 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6n-5A0A075B621 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6n-5A0A075B621 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6n-5A0A075B621 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6n-5A0A075B621 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav6n-5A0A075B621 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6n-5A0A075B621 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.21□□□□□ -0.13
Trav6n-5A0A075B621 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.21□□□□□ -0.13
Trav6n-5A0A075B621 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
Trav6n-5A0A075B621 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6n-5A0A075B621 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6n-5A0A075B621 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav6n-5A0A075B621 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6n-5A0A075B621 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6n-5A0A075B621 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Trav6n-5A0A075B621 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Trav6n-5A0A075B621 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6n-5A0A075B621 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav6n-5A0A075B621 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6n-5A0A075B621 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav6n-5A0A075B621 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6n-5A0A075B621 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6n-5A0A075B621 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6n-5A0A075B621 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6n-5A0A075B621 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6n-5A0A075B621 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6n-5A0A075B621 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6n-5A0A075B621 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6n-5A0A075B621 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6n-5A0A075B621 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6n-5A0A075B621 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6n-5A0A075B621 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6n-5A0A075B621 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.19□□□□□ -0.14
Trav6n-5A0A075B621 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6n-5A0A075B621 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6n-5A0A075B621 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav6n-5A0A075B621 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
Trav6n-5A0A075B621 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav6n-5A0A075B621 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6n-5A0A075B621 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6n-5A0A075B621 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6n-5A0A075B621 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav6n-5A0A075B621 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6n-5A0A075B621 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6n-5A0A075B621 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6n-5A0A075B621 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6n-5A0A075B621 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6n-5A0A075B621 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6n-5A0A075B621 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6n-5A0A075B621 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.18□□□□□ -0.14
Trav6n-5A0A075B621 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6n-5A0A075B621 Gm18755-201ENSMUST00000218030 1099 ntBASIC14.18□□□□□ -0.14
Trav6n-5A0A075B621 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms