Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Gm10855-201ENSMUST00000100426 2541 ntBASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Gm38381-201ENSMUST00000193594 2275 ntBASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 CT010470.1-201ENSMUST00000225364 1876 ntBASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Gm14762-201ENSMUST00000105109 1771 ntBASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Gm9585-201ENSMUST00000219681 1404 ntBASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Gm14787-201ENSMUST00000121236 388 ntBASIC6.62□□□□□ -1.35
Trim3Q9R1R2 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Gm6489-201ENSMUST00000178167 696 ntBASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Pea15b-201ENSMUST00000182806 387 ntBASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Gm18501-201ENSMUST00000185363 664 ntBASIC6.62□□□□□ -1.35
Trim3Q9R1R2 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Gm42804-201ENSMUST00000199701 178 ntBASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Gm44258-201ENSMUST00000204925 301 ntBASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Gm18860-201ENSMUST00000212029 764 ntBASIC6.62□□□□□ -1.35
Trim3Q9R1R2 AC124778.1-201ENSMUST00000216013 162 ntBASIC6.62□□□□□ -1.35
Trim3Q9R1R2 AC133948.2-201ENSMUST00000217850 378 ntBASIC6.62□□□□□ -1.35
Trim3Q9R1R2 AC120002.1-201ENSMUST00000218456 331 ntBASIC6.62□□□□□ -1.35
Trim3Q9R1R2 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 AC156574.1-201ENSMUST00000227084 452 ntBASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Olfr683-201ENSMUST00000061284 960 ntBASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Mir455-201ENSMUST00000093594 82 ntBASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Gm43022-201ENSMUST00000197067 4268 ntBASIC6.62□□□□□ -1.35
Trim3Q9R1R2 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm36930-201ENSMUST00000195431 2376 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 AC135083.2-201ENSMUST00000228599 1456 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm37278-201ENSMUST00000191619 2872 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm42653-201ENSMUST00000200644 2839 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm3555-201ENSMUST00000160287 1395 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm17170-201ENSMUST00000112785 316 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm11263-201ENSMUST00000121853 749 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Mir1907-201ENSMUST00000122509 90 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm26179-201ENSMUST00000177723 132 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm27018-201ENSMUST00000181136 225 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm18875-201ENSMUST00000188563 882 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm36928-201ENSMUST00000192466 694 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm37325-201ENSMUST00000194971 694 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm42464-202ENSMUST00000198111 774 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm5305-201ENSMUST00000204010 746 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm44252-201ENSMUST00000204187 330 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm43905-201ENSMUST00000204516 204 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm44566-201ENSMUST00000207638 304 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm6581-201ENSMUST00000214545 260 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 AC127224.1-201ENSMUST00000218094 453 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm19217-201ENSMUST00000218238 328 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 139.8 ms