Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 AC125095.1-201ENSMUST00000228387 2020 ntBASIC9.34□□□□□ -0.91
Ube3bQ9ES34 AC164092.3-201ENSMUST00000216970 1323 ntBASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Kbtbd4-201ENSMUST00000090682 2437 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Gm10388-201ENSMUST00000205001 2936 ntBASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 AC166341.5-201ENSMUST00000222206 1400 ntBASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Gm23484-201ENSMUST00000104178 131 ntBASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Gm12024-201ENSMUST00000118819 1253 ntBASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Gm12067-201ENSMUST00000119755 1148 ntBASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC9.34□□□□□ -0.91
Ube3bQ9ES34 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Gm25277-201ENSMUST00000157266 324 ntBASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Gm23222-201ENSMUST00000158117 76 ntBASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Gm26505-201ENSMUST00000176208 166 ntBASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Gm5835-201ENSMUST00000185806 1270 ntBASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Gm42818-201ENSMUST00000198869 987 ntBASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Klra13-ps-203ENSMUST00000204367 850 ntBASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 CT573422.1-201ENSMUST00000216655 405 ntBASIC9.34□□□□□ -0.91
Ube3bQ9ES34 AC122290.1-201ENSMUST00000225631 1078 ntBASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Gm37066-201ENSMUST00000192713 2061 ntBASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 AC164437.4-204ENSMUST00000227169 4024 ntBASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Elmo2-205ENSMUST00000103091 4695 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Gm42700-201ENSMUST00000199071 2437 ntBASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Olfr1532-ps1-203ENSMUST00000215949 2439 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Gm6767-201ENSMUST00000118650 1381 ntBASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Gm37326-201ENSMUST00000192828 3071 ntBASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Cfap46-202ENSMUST00000129990 8180 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Grik2-201ENSMUST00000079751 2610 ntTSL 2 BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Olfr56-206ENSMUST00000203810 1990 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Pcdh9-201ENSMUST00000068992 3714 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Abcc12-201ENSMUST00000080115 4511 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Nolc1-203ENSMUST00000223728 3523 ntAPPRIS ALT2 BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Gbp6-201ENSMUST00000196520 2604 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Gm15010-201ENSMUST00000117153 407 ntBASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Gm11926-201ENSMUST00000118520 430 ntBASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Gm8080-201ENSMUST00000122046 1155 ntBASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Gm12368-201ENSMUST00000122251 434 ntBASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Gm23079-201ENSMUST00000157847 117 ntBASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Gm24130-201ENSMUST00000158536 151 ntBASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Gm9236-201ENSMUST00000196892 587 ntBASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Gm29977-201ENSMUST00000206804 724 ntBASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Gm6477-201ENSMUST00000217098 764 ntBASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 AC174082.2-201ENSMUST00000222094 543 ntBASIC9.33□□□□□ -0.92
Ube3bQ9ES34 AC129935.1-201ENSMUST00000226302 873 ntBASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Gm6776-201ENSMUST00000057752 900 ntBASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ube3bQ9ES34 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms