Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Gm7091-201ENSMUST00000116438 586 ntBASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Gm12306-201ENSMUST00000117256 171 ntBASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Gm11245-201ENSMUST00000119419 1037 ntBASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Gm26480-201ENSMUST00000122619 297 ntBASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Gm10157-201ENSMUST00000139408 343 ntBASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Gm25277-201ENSMUST00000157266 324 ntBASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Mir7084-201ENSMUST00000183876 70 ntBASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Gm36935-201ENSMUST00000192526 292 ntBASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Gm43147-201ENSMUST00000196944 542 ntBASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Gm30517-201ENSMUST00000197350 772 ntBASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Gm44111-201ENSMUST00000204649 399 ntBASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Gm6667-201ENSMUST00000217169 564 ntBASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 n-R5s29-201ENSMUST00000082836 119 ntBASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Gm26130-201ENSMUST00000083171 138 ntBASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Chmp4bQ9D8B3 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Chmp4bQ9D8B3 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Chmp4bQ9D8B3 Gm37067-201ENSMUST00000195730 1628 ntBASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Gm45084-201ENSMUST00000207096 1957 ntBASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Gm12477-201ENSMUST00000121221 571 ntBASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Gm15538-201ENSMUST00000121410 313 ntBASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Gm26182-201ENSMUST00000157688 116 ntBASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Gm23222-201ENSMUST00000158117 76 ntBASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Gm4373-201ENSMUST00000178571 556 ntBASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Gm28413-201ENSMUST00000189369 291 ntBASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Gm37669-201ENSMUST00000192184 820 ntBASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Gm18430-201ENSMUST00000197534 682 ntBASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 CT009742.1-201ENSMUST00000222507 702 ntBASIC8.83□□□□□ -1
Chmp4bQ9D8B3 AC161877.2-201ENSMUST00000226248 545 ntBASIC8.83□□□□□ -1
Chmp4bQ9D8B3 AC164436.1-201ENSMUST00000227074 772 ntBASIC8.83□□□□□ -1
Chmp4bQ9D8B3 AC107453.3-201ENSMUST00000228205 639 ntBASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Gm44121-201ENSMUST00000205169 2006 ntBASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC8.83□□□□□ -1
Chmp4bQ9D8B3 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Chmp4bQ9D8B3 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC8.82□□□□□ -1
Chmp4bQ9D8B3 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Chmp4bQ9D8B3 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC8.82□□□□□ -1
Chmp4bQ9D8B3 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Chmp4bQ9D8B3 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC8.82□□□□□ -1
Chmp4bQ9D8B3 Gm6494-201ENSMUST00000218604 2298 ntBASIC8.82□□□□□ -1
Chmp4bQ9D8B3 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Chmp4bQ9D8B3 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Chmp4bQ9D8B3 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Chmp4bQ9D8B3 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Chmp4bQ9D8B3 Gm26016-201ENSMUST00000104403 129 ntBASIC8.82□□□□□ -1
Chmp4bQ9D8B3 Gm15158-201ENSMUST00000120577 570 ntBASIC8.82□□□□□ -1
Chmp4bQ9D8B3 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC8.82□□□□□ -1
Chmp4bQ9D8B3 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC8.82□□□□□ -1
Chmp4bQ9D8B3 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC8.82□□□□□ -1
Chmp4bQ9D8B3 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC8.82□□□□□ -1
Chmp4bQ9D8B3 Gm22552-201ENSMUST00000157796 337 ntBASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms