Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm28142-201ENSMUST00000186899 698 ntBASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm28455-201ENSMUST00000189105 1290 ntBASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm22149-202ENSMUST00000196259 137 ntBASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm3103-201ENSMUST00000198073 752 ntBASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm20223-201ENSMUST00000199932 805 ntBASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm5586-201ENSMUST00000206264 795 ntBASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 AC154904.1-201ENSMUST00000219510 312 ntBASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 AC146596.1-201ENSMUST00000223507 223 ntBASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 AC123534.1-201ENSMUST00000224060 656 ntBASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 n-R5s60-201ENSMUST00000083299 119 ntBASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm42763-201ENSMUST00000199595 2087 ntBASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm45221-201ENSMUST00000207822 2272 ntBASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm44584-201ENSMUST00000208395 2880 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Gm5949-201ENSMUST00000213468 1421 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Grik1-209ENSMUST00000227986 2942 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Gm25614-201ENSMUST00000104013 133 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Gm14864-201ENSMUST00000116164 1087 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Gm12677-201ENSMUST00000118668 426 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Gm14840-201ENSMUST00000122135 594 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Gm15187-201ENSMUST00000122329 264 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Gm25178-201ENSMUST00000122633 325 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Gm27018-201ENSMUST00000181136 225 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Mir6940-201ENSMUST00000183447 70 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Gm27866-201ENSMUST00000184459 171 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Gm5244-202ENSMUST00000189517 743 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Gm37322-201ENSMUST00000193409 337 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Gm43765-201ENSMUST00000196303 893 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Gm42734-201ENSMUST00000201656 878 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Gm45789-201ENSMUST00000213038 364 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Gm19007-201ENSMUST00000217746 874 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 AV026068-229ENSMUST00000225516 595 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Gm6054-201ENSMUST00000078052 378 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Gm24924-201ENSMUST00000084007 164 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 AC135119.1-202ENSMUST00000228435 2203 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms