Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm42898-201ENSMUST00000200370 3073 ntBASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm12021-201ENSMUST00000121061 1746 ntBASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 AC122769.1-201ENSMUST00000226930 1714 ntBASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 AC111010.1-203ENSMUST00000227287 1548 ntBASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm42577-201ENSMUST00000201367 3211 ntBASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm42478-201ENSMUST00000199252 1467 ntBASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm15000-201ENSMUST00000118275 1243 ntBASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm16044-201ENSMUST00000118475 450 ntBASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm13006-201ENSMUST00000118683 214 ntBASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm12104-201ENSMUST00000120359 979 ntBASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm13221-201ENSMUST00000121712 430 ntBASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Mir7005-201ENSMUST00000185089 69 ntBASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm5723-201ENSMUST00000203096 432 ntBASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm44112-201ENSMUST00000204787 372 ntBASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm45725-201ENSMUST00000212962 337 ntBASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 AC154849.2-201ENSMUST00000223781 974 ntBASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 AC154361.1-201ENSMUST00000225694 745 ntBASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 AC107763.1-202ENSMUST00000225021 2663 ntBASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sf3a1Q8K4Z5 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Gm11864-201ENSMUST00000116179 1220 ntBASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Gm11903-201ENSMUST00000118958 727 ntBASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Gm24286-201ENSMUST00000157632 128 ntBASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Gm26183-201ENSMUST00000157685 139 ntBASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Gm8245-201ENSMUST00000182434 987 ntBASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Mir6241-201ENSMUST00000184225 103 ntBASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Gm27972-201ENSMUST00000184720 137 ntBASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Mir6769b-201ENSMUST00000184793 60 ntBASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Gm42580-201ENSMUST00000197223 753 ntBASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Gm44833-201ENSMUST00000208368 331 ntBASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Gm44982-201ENSMUST00000208795 471 ntBASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Gm45259-201ENSMUST00000209217 1006 ntBASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Gm9231-201ENSMUST00000220817 1009 ntBASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Sf3a1Q8K4Z5 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Sf3a1Q8K4Z5 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Gm11342-203ENSMUST00000224879 1324 ntBASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms