Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Gm2108-201ENSMUST00000165058 2177 ntBASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Gm44194-201ENSMUST00000204222 3229 ntBASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm38070-201ENSMUST00000191850 6480 ntBASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Scgb1b7-201ENSMUST00000108097 419 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm11207-201ENSMUST00000117824 414 ntBASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm11810-201ENSMUST00000118311 333 ntBASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm13930-201ENSMUST00000118569 368 ntBASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm11485-201ENSMUST00000120048 1175 ntBASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm15644-201ENSMUST00000121764 387 ntBASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm1947-201ENSMUST00000122451 910 ntBASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm26323-201ENSMUST00000157743 175 ntBASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 1700025N21Rik-201ENSMUST00000160997 686 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Six3os1-213ENSMUST00000177487 537 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Mir1897-202ENSMUST00000198006 79 ntBASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm42752-201ENSMUST00000198394 1106 ntBASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm7542-201ENSMUST00000201140 777 ntBASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm18192-201ENSMUST00000210174 941 ntBASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm18860-201ENSMUST00000212029 764 ntBASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm34424-201ENSMUST00000213400 782 ntBASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm36758-201ENSMUST00000222594 310 ntBASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 1700066J03Rik-202ENSMUST00000224280 516 ntBASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 AV026068-225ENSMUST00000225042 490 ntBASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 AC161537.1-202ENSMUST00000228450 868 ntBASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Churc1-201ENSMUST00000041262 676 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.87□□□□□ -1.31
Ccdc28bQ8CEG5 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Gm18359-201ENSMUST00000173024 1459 ntBASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Ghrh-202ENSMUST00000109536 503 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Gm12445-201ENSMUST00000117947 885 ntBASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Gm25842-201ENSMUST00000122590 322 ntBASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC6.86□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms