Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC8.12□□□□□ -1.11
Alx1Q8C8B0 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Alx1Q8C8B0 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Alx1Q8C8B0 Gm45477-201ENSMUST00000200213 5498 ntBASIC8.12□□□□□ -1.11
Alx1Q8C8B0 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Alx1Q8C8B0 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Gm43221-201ENSMUST00000197612 2071 ntBASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Gm25344-201ENSMUST00000104503 132 ntBASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Gm13754-201ENSMUST00000120486 998 ntBASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Gm13462-201ENSMUST00000121472 961 ntBASIC8.11□□□□□ -1.11
Alx1Q8C8B0 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Gm25717-201ENSMUST00000158631 353 ntBASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Gm24545-201ENSMUST00000158651 85 ntBASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Gm29141-201ENSMUST00000190357 882 ntBASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Olfr809-203ENSMUST00000218237 1100 ntBASIC8.11□□□□□ -1.11
Alx1Q8C8B0 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Gm31711-201ENSMUST00000220687 196 ntBASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Gm4808-201ENSMUST00000222283 1203 ntBASIC8.11□□□□□ -1.11
Alx1Q8C8B0 AC102676.1-201ENSMUST00000228131 719 ntBASIC8.11□□□□□ -1.11
Alx1Q8C8B0 AC122459.3-201ENSMUST00000228508 1042 ntBASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 AC129208.1-201ENSMUST00000227474 2906 ntBASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Gm10568-201ENSMUST00000193244 1634 ntBASIC8.11□□□□□ -1.11
Alx1Q8C8B0 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Gm5702-201ENSMUST00000185629 2469 ntBASIC8.1□□□□□ -1.11
Alx1Q8C8B0 AC124680.1-201ENSMUST00000223923 1585 ntBASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Alx1Q8C8B0 AC154461.6-201ENSMUST00000224815 2630 ntBASIC8.1□□□□□ -1.11
Alx1Q8C8B0 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Gm11689-201ENSMUST00000120766 302 ntBASIC8.1□□□□□ -1.11
Alx1Q8C8B0 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Gm25395-201ENSMUST00000157343 272 ntBASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Gm9556-201ENSMUST00000182938 940 ntBASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Gm28929-201ENSMUST00000185330 1193 ntBASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Alx1Q8C8B0 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Gm37871-201ENSMUST00000194973 688 ntBASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Alx1Q8C8B0 AC154640.1-202ENSMUST00000227828 496 ntBASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Gm9985-201ENSMUST00000044101 510 ntBASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Gm24036-201ENSMUST00000082868 156 ntBASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Gm7731-201ENSMUST00000091759 470 ntBASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Gm6419-201ENSMUST00000097166 429 ntBASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Gm6101-201ENSMUST00000195384 1867 ntBASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Gm37364-201ENSMUST00000192533 3920 ntBASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Alx1Q8C8B0 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Alx1Q8C8B0 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Alx1Q8C8B0 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Alx1Q8C8B0 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.11
Alx1Q8C8B0 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms