Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 AC158988.1-201ENSMUST00000226731 2624 ntBASIC9.8□□□□□ -0.84
Usp47Q8BY87 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp47Q8BY87 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Usp47Q8BY87 Gm44777-201ENSMUST00000205941 4052 ntBASIC9.8□□□□□ -0.84
Usp47Q8BY87 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp47Q8BY87 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp47Q8BY87 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC9.8□□□□□ -0.84
Usp47Q8BY87 Apc-ps1-201ENSMUST00000119356 470 ntBASIC9.8□□□□□ -0.84
Usp47Q8BY87 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Usp47Q8BY87 Gm7613-201ENSMUST00000139070 487 ntBASIC9.8□□□□□ -0.84
Usp47Q8BY87 Gm10364-202ENSMUST00000153034 1001 ntBASIC9.8□□□□□ -0.84
Usp47Q8BY87 Gm23276-201ENSMUST00000157913 138 ntBASIC9.8□□□□□ -0.84
Usp47Q8BY87 Gm8550-201ENSMUST00000161621 653 ntBASIC9.8□□□□□ -0.84
Usp47Q8BY87 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC9.8□□□□□ -0.84
Usp47Q8BY87 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Usp47Q8BY87 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Usp47Q8BY87 Gm18012-201ENSMUST00000204558 773 ntBASIC9.8□□□□□ -0.84
Usp47Q8BY87 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC9.8□□□□□ -0.84
Usp47Q8BY87 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC9.8□□□□□ -0.84
Usp47Q8BY87 Gm2139-201ENSMUST00000222569 1075 ntBASIC9.8□□□□□ -0.84
Usp47Q8BY87 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Usp47Q8BY87 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Usp47Q8BY87 Gm37877-201ENSMUST00000191630 2709 ntBASIC9.8□□□□□ -0.84
Usp47Q8BY87 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Usp47Q8BY87 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Usp47Q8BY87 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp47Q8BY87 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp47Q8BY87 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Usp47Q8BY87 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC9.8□□□□□ -0.84
Usp47Q8BY87 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC9.8□□□□□ -0.84
Usp47Q8BY87 Gm42653-201ENSMUST00000200644 2839 ntBASIC9.8□□□□□ -0.84
Usp47Q8BY87 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Usp47Q8BY87 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Usp47Q8BY87 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp47Q8BY87 Med12-204ENSMUST00000117706 6940 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Usp47Q8BY87 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Usp47Q8BY87 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp47Q8BY87 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC9.79□□□□□ -0.84
Usp47Q8BY87 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Usp47Q8BY87 Gm23891-201ENSMUST00000158114 138 ntBASIC9.79□□□□□ -0.84
Usp47Q8BY87 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC9.79□□□□□ -0.84
Usp47Q8BY87 Gm28929-201ENSMUST00000185330 1193 ntBASIC9.79□□□□□ -0.84
Usp47Q8BY87 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC9.79□□□□□ -0.84
Usp47Q8BY87 Gm37383-201ENSMUST00000191750 745 ntBASIC9.79□□□□□ -0.84
Usp47Q8BY87 Gm38068-201ENSMUST00000192546 540 ntBASIC9.79□□□□□ -0.84
Usp47Q8BY87 Gm43689-201ENSMUST00000195951 427 ntBASIC9.79□□□□□ -0.84
Usp47Q8BY87 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC9.79□□□□□ -0.84
Usp47Q8BY87 AC154558.1-201ENSMUST00000222278 415 ntBASIC9.79□□□□□ -0.84
Usp47Q8BY87 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Usp47Q8BY87 AC154640.1-202ENSMUST00000227828 496 ntBASIC9.79□□□□□ -0.84
Usp47Q8BY87 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp47Q8BY87 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp47Q8BY87 Gm37525-201ENSMUST00000193499 2871 ntBASIC9.79□□□□□ -0.84
Usp47Q8BY87 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp47Q8BY87 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Usp47Q8BY87 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Usp47Q8BY87 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp47Q8BY87 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Usp47Q8BY87 AC159264.1-201ENSMUST00000224844 4257 ntBASIC9.79□□□□□ -0.84
Usp47Q8BY87 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Usp47Q8BY87 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp47Q8BY87 Gm14976-201ENSMUST00000117055 1394 ntBASIC9.78□□□□□ -0.84
Usp47Q8BY87 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Usp47Q8BY87 Gm43029-201ENSMUST00000201829 1535 ntBASIC9.78□□□□□ -0.84
Usp47Q8BY87 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usp47Q8BY87 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Usp47Q8BY87 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC9.78□□□□□ -0.84
Usp47Q8BY87 Gm13983-201ENSMUST00000118018 865 ntBASIC9.78□□□□□ -0.84
Usp47Q8BY87 Gm14863-201ENSMUST00000119648 307 ntBASIC9.78□□□□□ -0.84
Usp47Q8BY87 Gm13462-201ENSMUST00000121472 961 ntBASIC9.78□□□□□ -0.84
Usp47Q8BY87 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC9.78□□□□□ -0.84
Usp47Q8BY87 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usp47Q8BY87 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC9.78□□□□□ -0.84
Usp47Q8BY87 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usp47Q8BY87 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Usp47Q8BY87 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usp47Q8BY87 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC9.78□□□□□ -0.84
Usp47Q8BY87 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usp47Q8BY87 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usp47Q8BY87 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC9.78□□□□□ -0.84
Usp47Q8BY87 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC9.78□□□□□ -0.84
Usp47Q8BY87 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC9.78□□□□□ -0.84
Usp47Q8BY87 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC9.78□□□□□ -0.84
Usp47Q8BY87 AC163621.1-201ENSMUST00000220695 379 ntBASIC9.78□□□□□ -0.84
Usp47Q8BY87 AC114008.1-201ENSMUST00000226193 937 ntBASIC9.78□□□□□ -0.84
Usp47Q8BY87 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Usp47Q8BY87 Gm7961-201ENSMUST00000201338 1436 ntBASIC9.78□□□□□ -0.84
Usp47Q8BY87 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usp47Q8BY87 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usp47Q8BY87 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usp47Q8BY87 Gm28667-201ENSMUST00000189873 2171 ntBASIC9.78□□□□□ -0.84
Usp47Q8BY87 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usp47Q8BY87 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usp47Q8BY87 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC9.78□□□□□ -0.84
Usp47Q8BY87 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Usp47Q8BY87 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Usp47Q8BY87 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usp47Q8BY87 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usp47Q8BY87 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Usp47Q8BY87 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC9.77□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms