Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PrkdcP97313 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PrkdcP97313 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PrkdcP97313 Gm27152-201ENSMUST00000183828 99 ntBASIC4.59□□□□□ -1.67
PrkdcP97313 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PrkdcP97313 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PrkdcP97313 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PrkdcP97313 Gm20932-201ENSMUST00000189115 694 ntBASIC4.59□□□□□ -1.67
PrkdcP97313 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PrkdcP97313 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC4.59□□□□□ -1.67
PrkdcP97313 Gm17950-201ENSMUST00000214617 646 ntBASIC4.59□□□□□ -1.67
PrkdcP97313 CT025616.1-201ENSMUST00000221158 412 ntBASIC4.59□□□□□ -1.67
PrkdcP97313 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PrkdcP97313 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC4.59□□□□□ -1.67
PrkdcP97313 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PrkdcP97313 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
PrkdcP97313 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
PrkdcP97313 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PrkdcP97313 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PrkdcP97313 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PrkdcP97313 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC4.59□□□□□ -1.67
PrkdcP97313 Zbtb26-201ENSMUST00000067043 5267 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PrkdcP97313 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.68
PrkdcP97313 Gm36936-201ENSMUST00000194508 2749 ntBASIC4.59□□□□□ -1.68
PrkdcP97313 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
PrkdcP97313 Gm19065-202ENSMUST00000203910 1165 ntBASIC4.59□□□□□ -1.68
PrkdcP97313 Gm17988-201ENSMUST00000208796 535 ntBASIC4.59□□□□□ -1.68
PrkdcP97313 Gm33601-201ENSMUST00000210001 961 ntBASIC4.59□□□□□ -1.68
PrkdcP97313 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC4.59□□□□□ -1.68
PrkdcP97313 AC153937.1-201ENSMUST00000218734 412 ntBASIC4.59□□□□□ -1.68
PrkdcP97313 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
PrkdcP97313 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PrkdcP97313 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
PrkdcP97313 Gm10540-201ENSMUST00000097581 276 ntBASIC4.59□□□□□ -1.68
PrkdcP97313 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
PrkdcP97313 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PrkdcP97313 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
PrkdcP97313 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC4.59□□□□□ -1.68
PrkdcP97313 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PrkdcP97313 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
PrkdcP97313 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC4.59□□□□□ -1.68
PrkdcP97313 Zswim9-202ENSMUST00000119139 3986 ntAPPRIS P5 TSL 1 (best) BASIC4.59□□□□□ -1.68
PrkdcP97313 Pah-201ENSMUST00000020241 2142 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PrkdcP97313 Cep95-201ENSMUST00000018516 2696 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
PrkdcP97313 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.68
PrkdcP97313 Myo1f-201ENSMUST00000087605 3819 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PrkdcP97313 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
PrkdcP97313 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PrkdcP97313 Hspbap1-201ENSMUST00000023555 4590 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PrkdcP97313 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PrkdcP97313 AC129308.1-201ENSMUST00000223800 2309 ntBASIC4.59□□□□□ -1.68
PrkdcP97313 Ebf2-201ENSMUST00000022637 4352 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PrkdcP97313 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
PrkdcP97313 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PrkdcP97313 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PrkdcP97313 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PrkdcP97313 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PrkdcP97313 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PrkdcP97313 Gm11197-201ENSMUST00000145158 839 ntBASIC4.58□□□□□ -1.68
PrkdcP97313 Gm4997-201ENSMUST00000154056 360 ntBASIC4.58□□□□□ -1.68
PrkdcP97313 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC4.58□□□□□ -1.68
PrkdcP97313 Gm18699-201ENSMUST00000190713 243 ntBASIC4.58□□□□□ -1.68
PrkdcP97313 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PrkdcP97313 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC4.58□□□□□ -1.68
PrkdcP97313 Gm7570-201ENSMUST00000215246 698 ntBASIC4.58□□□□□ -1.68
PrkdcP97313 Gm18705-201ENSMUST00000215985 913 ntBASIC4.58□□□□□ -1.68
PrkdcP97313 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PrkdcP97313 AC161374.1-201ENSMUST00000224191 794 ntBASIC4.58□□□□□ -1.68
PrkdcP97313 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PrkdcP97313 Gm42444-201ENSMUST00000199366 4558 ntBASIC4.58□□□□□ -1.68
PrkdcP97313 Gm44704-201ENSMUST00000208963 1990 ntBASIC4.58□□□□□ -1.68
PrkdcP97313 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PrkdcP97313 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PrkdcP97313 Vmn1r40-202ENSMUST00000226925 3011 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PrkdcP97313 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PrkdcP97313 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
PrkdcP97313 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC4.58□□□□□ -1.68
PrkdcP97313 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
PrkdcP97313 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PrkdcP97313 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PrkdcP97313 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC4.58□□□□□ -1.68
PrkdcP97313 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC4.58□□□□□ -1.68
PrkdcP97313 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC4.58□□□□□ -1.68
PrkdcP97313 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC4.58□□□□□ -1.68
PrkdcP97313 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC4.58□□□□□ -1.68
PrkdcP97313 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC4.58□□□□□ -1.68
PrkdcP97313 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC4.58□□□□□ -1.68
PrkdcP97313 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC4.58□□□□□ -1.68
PrkdcP97313 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PrkdcP97313 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PrkdcP97313 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
PrkdcP97313 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PrkdcP97313 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC4.58□□□□□ -1.68
PrkdcP97313 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PrkdcP97313 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PrkdcP97313 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PrkdcP97313 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC4.58□□□□□ -1.68
PrkdcP97313 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC4.58□□□□□ -1.68
PrkdcP97313 Gm18290-201ENSMUST00000202900 844 ntBASIC4.58□□□□□ -1.68
PrkdcP97313 Gm44265-201ENSMUST00000203631 465 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms