Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm23903-201ENSMUST00000157566 131 ntBASIC8.92□□□□□ -0.98
Msh6P54276 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Msh6P54276 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Msh6P54276 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Msh6P54276 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC8.92□□□□□ -0.98
Msh6P54276 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Msh6P54276 Gm28413-201ENSMUST00000189369 291 ntBASIC8.92□□□□□ -0.98
Msh6P54276 Gm37349-201ENSMUST00000194205 624 ntBASIC8.92□□□□□ -0.98
Msh6P54276 Gm19088-201ENSMUST00000198800 566 ntBASIC8.92□□□□□ -0.98
Msh6P54276 Gm8667-201ENSMUST00000211112 449 ntBASIC8.92□□□□□ -0.98
Msh6P54276 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC8.92□□□□□ -0.98
Msh6P54276 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Msh6P54276 Gm18040-201ENSMUST00000217922 827 ntBASIC8.92□□□□□ -0.98
Msh6P54276 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Msh6P54276 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC8.92□□□□□ -0.98
Msh6P54276 CT009742.1-201ENSMUST00000222507 702 ntBASIC8.92□□□□□ -0.98
Msh6P54276 AC156559.2-201ENSMUST00000224403 384 ntBASIC8.92□□□□□ -0.98
Msh6P54276 Vmn1r41-202ENSMUST00000226337 888 ntBASIC8.92□□□□□ -0.98
Msh6P54276 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC8.92□□□□□ -0.98
Msh6P54276 AC138765.3-201ENSMUST00000227981 423 ntBASIC8.92□□□□□ -0.98
Msh6P54276 Mir138-1-201ENSMUST00000083480 99 ntBASIC8.92□□□□□ -0.98
Msh6P54276 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Msh6P54276 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Msh6P54276 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Msh6P54276 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Msh6P54276 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Msh6P54276 Gm43335-201ENSMUST00000198299 3276 ntBASIC8.92□□□□□ -0.98
Msh6P54276 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Msh6P54276 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Msh6P54276 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
Msh6P54276 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Msh6P54276 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Msh6P54276 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Msh6P54276 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Msh6P54276 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Msh6P54276 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Msh6P54276 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Msh6P54276 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Msh6P54276 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC8.91□□□□□ -0.98
Msh6P54276 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
Msh6P54276 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Msh6P54276 Gm43169-201ENSMUST00000199544 4734 ntBASIC8.91□□□□□ -0.98
Msh6P54276 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Msh6P54276 Akap2-207ENSMUST00000107600 7231 ntTSL 2 BASIC8.91□□□□□ -0.98
Msh6P54276 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Msh6P54276 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Msh6P54276 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Msh6P54276 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC8.91□□□□□ -0.98
Msh6P54276 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC8.91□□□□□ -0.98
Msh6P54276 Gm13357-201ENSMUST00000120528 537 ntBASIC8.91□□□□□ -0.98
Msh6P54276 Gm12754-201ENSMUST00000121908 454 ntBASIC8.91□□□□□ -0.98
Msh6P54276 Gm12540-201ENSMUST00000121938 319 ntBASIC8.91□□□□□ -0.98
Msh6P54276 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Msh6P54276 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Msh6P54276 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Msh6P54276 Gm44565-201ENSMUST00000208194 269 ntBASIC8.91□□□□□ -0.98
Msh6P54276 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC8.91□□□□□ -0.98
Msh6P54276 Gm3678-201ENSMUST00000218888 492 ntBASIC8.91□□□□□ -0.98
Msh6P54276 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC8.91□□□□□ -0.98
Msh6P54276 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Msh6P54276 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Msh6P54276 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Msh6P54276 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC8.91□□□□□ -0.98
Msh6P54276 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Msh6P54276 Gm29670-201ENSMUST00000190228 2491 ntBASIC8.91□□□□□ -0.98
Msh6P54276 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Msh6P54276 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC8.91□□□□□ -0.98
Msh6P54276 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Msh6P54276 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Msh6P54276 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Msh6P54276 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Msh6P54276 Gm4927-201ENSMUST00000219548 1318 ntBASIC8.9□□□□□ -0.98
Msh6P54276 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Msh6P54276 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Msh6P54276 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Msh6P54276 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Msh6P54276 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Msh6P54276 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Msh6P54276 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC8.9□□□□□ -0.98
Msh6P54276 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Msh6P54276 Gm25724-201ENSMUST00000104531 117 ntBASIC8.9□□□□□ -0.98
Msh6P54276 Gm11920-201ENSMUST00000118491 563 ntBASIC8.9□□□□□ -0.98
Msh6P54276 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Msh6P54276 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC8.9□□□□□ -0.98
Msh6P54276 Gm23968-201ENSMUST00000175047 125 ntBASIC8.9□□□□□ -0.98
Msh6P54276 Mir3473g-201ENSMUST00000183494 136 ntBASIC8.9□□□□□ -0.98
Msh6P54276 Gm28958-201ENSMUST00000185864 703 ntBASIC8.9□□□□□ -0.98
Msh6P54276 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Msh6P54276 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC8.9□□□□□ -0.98
Msh6P54276 Gm36965-201ENSMUST00000193797 394 ntBASIC8.9□□□□□ -0.98
Msh6P54276 Gm5154-201ENSMUST00000203971 399 ntBASIC8.9□□□□□ -0.98
Msh6P54276 Gm9367-201ENSMUST00000205703 546 ntBASIC8.9□□□□□ -0.98
Msh6P54276 Gm44571-201ENSMUST00000208092 533 ntBASIC8.9□□□□□ -0.98
Msh6P54276 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Msh6P54276 AC154642.1-201ENSMUST00000224173 740 ntBASIC8.9□□□□□ -0.98
Msh6P54276 AC156790.1-201ENSMUST00000226572 559 ntBASIC8.9□□□□□ -0.98
Msh6P54276 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Msh6P54276 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Msh6P54276 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Msh6P54276 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms