Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC7.11□□□□□ -1.27
HttP42859 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
HttP42859 Gm25065-201ENSMUST00000177914 132 ntBASIC7.11□□□□□ -1.27
HttP42859 Gm25891-201ENSMUST00000180050 132 ntBASIC7.11□□□□□ -1.27
HttP42859 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HttP42859 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC7.11□□□□□ -1.27
HttP42859 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HttP42859 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC7.11□□□□□ -1.27
HttP42859 AC156037.1-201ENSMUST00000221133 127 ntBASIC7.11□□□□□ -1.27
HttP42859 AC125543.3-201ENSMUST00000221991 126 ntBASIC7.11□□□□□ -1.27
HttP42859 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HttP42859 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
HttP42859 Gm8362-201ENSMUST00000168790 1762 ntAPPRIS P5 TSL 5 BASIC7.11□□□□□ -1.27
HttP42859 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HttP42859 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HttP42859 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
HttP42859 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HttP42859 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
HttP42859 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
HttP42859 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
HttP42859 Gm13887-201ENSMUST00000119009 344 ntBASIC7.1□□□□□ -1.27
HttP42859 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HttP42859 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC7.1□□□□□ -1.27
HttP42859 Gm5947-201ENSMUST00000179156 714 ntBASIC7.1□□□□□ -1.27
HttP42859 Gm5645-201ENSMUST00000179597 714 ntBASIC7.1□□□□□ -1.27
HttP42859 Mir7031-201ENSMUST00000183860 65 ntBASIC7.1□□□□□ -1.27
HttP42859 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC7.1□□□□□ -1.27
HttP42859 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC7.1□□□□□ -1.27
HttP42859 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC7.1□□□□□ -1.27
HttP42859 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC7.1□□□□□ -1.27
HttP42859 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
HttP42859 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC7.1□□□□□ -1.27
HttP42859 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC7.1□□□□□ -1.27
HttP42859 Gm19035-202ENSMUST00000194575 959 ntBASIC7.1□□□□□ -1.27
HttP42859 Ighv5-3-201ENSMUST00000195336 322 ntBASIC7.1□□□□□ -1.27
HttP42859 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC7.1□□□□□ -1.27
HttP42859 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC7.1□□□□□ -1.27
HttP42859 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HttP42859 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HttP42859 Gabrb3-206ENSMUST00000196198 4348 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HttP42859 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
HttP42859 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC7.1□□□□□ -1.27
HttP42859 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
HttP42859 Gm37234-201ENSMUST00000193259 1441 ntBASIC7.1□□□□□ -1.27
HttP42859 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC7.1□□□□□ -1.27
HttP42859 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC7.1□□□□□ -1.27
HttP42859 Gm23669-201ENSMUST00000157470 128 ntBASIC7.1□□□□□ -1.27
HttP42859 Gm19653-201ENSMUST00000204326 1039 ntBASIC7.1□□□□□ -1.27
HttP42859 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC7.1□□□□□ -1.27
HttP42859 Gm9118-201ENSMUST00000219246 754 ntBASIC7.1□□□□□ -1.27
HttP42859 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC7.1□□□□□ -1.27
HttP42859 Gm9237-201ENSMUST00000221499 548 ntBASIC7.1□□□□□ -1.27
HttP42859 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HttP42859 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
HttP42859 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HttP42859 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HttP42859 Rtl5-201ENSMUST00000113631 4653 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
HttP42859 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
HttP42859 Olfr126-203ENSMUST00000217487 1859 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
HttP42859 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
HttP42859 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HttP42859 Gm16423-201ENSMUST00000120078 947 ntBASIC7.1□□□□□ -1.27
HttP42859 Gm14038-201ENSMUST00000121500 807 ntBASIC7.1□□□□□ -1.27
HttP42859 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
HttP42859 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC7.1□□□□□ -1.27
HttP42859 Gm9088-201ENSMUST00000220237 508 ntBASIC7.1□□□□□ -1.27
HttP42859 AV026068-231ENSMUST00000225862 482 ntBASIC7.1□□□□□ -1.27
HttP42859 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC7.09□□□□□ -1.27
HttP42859 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
HttP42859 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HttP42859 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HttP42859 Gm2762-207ENSMUST00000202739 2665 ntBASIC7.09□□□□□ -1.27
HttP42859 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC7.09□□□□□ -1.27
HttP42859 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HttP42859 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HttP42859 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HttP42859 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HttP42859 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HttP42859 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HttP42859 Gm44165-201ENSMUST00000203093 1469 ntBASIC7.09□□□□□ -1.27
HttP42859 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
HttP42859 Epas1-201ENSMUST00000024954 5309 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HttP42859 AC127597.1-201ENSMUST00000225697 5711 ntBASIC7.09□□□□□ -1.27
HttP42859 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HttP42859 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC7.09□□□□□ -1.27
HttP42859 Tacr1-202ENSMUST00000203775 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HttP42859 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HttP42859 Gm15531-201ENSMUST00000118062 252 ntBASIC7.09□□□□□ -1.27
HttP42859 Gm14267-201ENSMUST00000119751 496 ntBASIC7.09□□□□□ -1.27
HttP42859 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HttP42859 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC7.09□□□□□ -1.27
HttP42859 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
HttP42859 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC7.09□□□□□ -1.27
HttP42859 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC7.09□□□□□ -1.27
HttP42859 Gm46364-201ENSMUST00000218548 319 ntBASIC7.09□□□□□ -1.27
HttP42859 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
HttP42859 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
HttP42859 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HttP42859 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC7.09□□□□□ -1.27
HttP42859 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms