Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Lire1P11260 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Lire1P11260 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Lire1P11260 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Lire1P11260 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Lire1P11260 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
Lire1P11260 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.93□□□□□ -1.3
Lire1P11260 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Lire1P11260 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Lire1P11260 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Lire1P11260 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Lire1P11260 Gm6823-201ENSMUST00000120791 1839 ntBASIC6.93□□□□□ -1.3
Lire1P11260 AC124516.1-201ENSMUST00000221845 3544 ntBASIC6.93□□□□□ -1.3
Lire1P11260 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
Lire1P11260 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Lire1P11260 Gm6491-201ENSMUST00000118273 990 ntBASIC6.93□□□□□ -1.3
Lire1P11260 Gm7571-201ENSMUST00000120252 927 ntBASIC6.93□□□□□ -1.3
Lire1P11260 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Lire1P11260 Gm4835-201ENSMUST00000155839 972 ntBASIC6.93□□□□□ -1.3
Lire1P11260 Gm21999-201ENSMUST00000165985 387 ntBASIC6.93□□□□□ -1.3
Lire1P11260 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Lire1P11260 Gm27782-201ENSMUST00000185059 199 ntBASIC6.93□□□□□ -1.3
Lire1P11260 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC6.93□□□□□ -1.3
Lire1P11260 Gm29362-201ENSMUST00000187898 133 ntBASIC6.93□□□□□ -1.3
Lire1P11260 Gm28918-201ENSMUST00000188822 699 ntBASIC6.93□□□□□ -1.3
Lire1P11260 Gm29273-201ENSMUST00000188880 262 ntBASIC6.93□□□□□ -1.3
Lire1P11260 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC6.93□□□□□ -1.3
Lire1P11260 Gm37469-201ENSMUST00000193728 890 ntBASIC6.93□□□□□ -1.3
Lire1P11260 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
Lire1P11260 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Lire1P11260 Gm44809-201ENSMUST00000208305 993 ntBASIC6.93□□□□□ -1.3
Lire1P11260 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC6.93□□□□□ -1.3
Lire1P11260 AC164550.1-201ENSMUST00000217821 1066 ntBASIC6.93□□□□□ -1.3
Lire1P11260 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC6.93□□□□□ -1.3
Lire1P11260 AC125543.2-201ENSMUST00000222114 105 ntBASIC6.93□□□□□ -1.3
Lire1P11260 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Lire1P11260 CT030170.7-201ENSMUST00000223372 103 ntBASIC6.93□□□□□ -1.3
Lire1P11260 AC118006.3-201ENSMUST00000223948 1176 ntBASIC6.93□□□□□ -1.3
Lire1P11260 AC124196.1-201ENSMUST00000225970 1032 ntBASIC6.93□□□□□ -1.3
Lire1P11260 Olfr120-201ENSMUST00000077498 993 ntBASIC6.93□□□□□ -1.3
Lire1P11260 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Lire1P11260 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Lire1P11260 CT010470.1-201ENSMUST00000225364 1876 ntBASIC6.93□□□□□ -1.3
Lire1P11260 Gm44752-201ENSMUST00000207140 3305 ntBASIC6.93□□□□□ -1.3
Lire1P11260 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.93□□□□□ -1.3
Lire1P11260 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Lire1P11260 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC6.93□□□□□ -1.3
Lire1P11260 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Lire1P11260 Gm42595-201ENSMUST00000196771 1607 ntBASIC6.93□□□□□ -1.3
Lire1P11260 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Lire1P11260 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Lire1P11260 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Lire1P11260 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Lire1P11260 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Lire1P11260 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Lire1P11260 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Lire1P11260 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Lire1P11260 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Lire1P11260 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Lire1P11260 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Lire1P11260 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Lire1P11260 CT009480.2-201ENSMUST00000225152 3369 ntBASIC6.92□□□□□ -1.3
Lire1P11260 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Lire1P11260 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
Lire1P11260 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC6.92□□□□□ -1.3
Lire1P11260 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC6.92□□□□□ -1.3
Lire1P11260 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.92□□□□□ -1.3
Lire1P11260 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Lire1P11260 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
Lire1P11260 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Lire1P11260 Gm13858-201ENSMUST00000118862 671 ntBASIC6.92□□□□□ -1.3
Lire1P11260 Gm11517-201ENSMUST00000119491 387 ntBASIC6.92□□□□□ -1.3
Lire1P11260 Gm13038-201ENSMUST00000119886 459 ntBASIC6.92□□□□□ -1.3
Lire1P11260 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC6.92□□□□□ -1.3
Lire1P11260 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC6.92□□□□□ -1.3
Lire1P11260 Mir1968-201ENSMUST00000157429 68 ntBASIC6.92□□□□□ -1.3
Lire1P11260 Gm22604-201ENSMUST00000157604 311 ntBASIC6.92□□□□□ -1.3
Lire1P11260 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Gm22852-201ENSMUST00000177899 101 ntBASIC6.92□□□□□ -1.3
Lire1P11260 Gm6489-201ENSMUST00000178167 696 ntBASIC6.92□□□□□ -1.3
Lire1P11260 Gm5327-201ENSMUST00000182864 1009 ntBASIC6.92□□□□□ -1.3
Lire1P11260 Gm6931-201ENSMUST00000183103 371 ntBASIC6.92□□□□□ -1.3
Lire1P11260 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC6.92□□□□□ -1.3
Lire1P11260 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC6.92□□□□□ -1.3
Lire1P11260 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC6.92□□□□□ -1.3
Lire1P11260 Gm43928-201ENSMUST00000203737 409 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 146.7 ms