Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hmgb3O54879 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC5.63□□□□□ -1.51
Hmgb3O54879 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
Hmgb3O54879 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hmgb3O54879 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC5.62□□□□□ -1.51
Hmgb3O54879 AC164567.3-201ENSMUST00000217743 2869 ntBASIC5.62□□□□□ -1.51
Hmgb3O54879 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hmgb3O54879 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hmgb3O54879 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Hmgb3O54879 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hmgb3O54879 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Hmgb3O54879 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Hmgb3O54879 Gm42994-201ENSMUST00000195964 2549 ntBASIC5.62□□□□□ -1.51
Hmgb3O54879 Igkv6-29-201ENSMUST00000103379 344 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Hmgb3O54879 Gm11850-201ENSMUST00000119679 479 ntBASIC5.62□□□□□ -1.51
Hmgb3O54879 Gm8084-201ENSMUST00000120807 752 ntBASIC5.62□□□□□ -1.51
Hmgb3O54879 Gm14787-201ENSMUST00000121236 388 ntBASIC5.62□□□□□ -1.51
Hmgb3O54879 Gm15644-201ENSMUST00000121764 387 ntBASIC5.62□□□□□ -1.51
Hmgb3O54879 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hmgb3O54879 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC5.62□□□□□ -1.51
Hmgb3O54879 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC5.62□□□□□ -1.51
Hmgb3O54879 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC5.62□□□□□ -1.51
Hmgb3O54879 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hmgb3O54879 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Hmgb3O54879 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hmgb3O54879 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
Hmgb3O54879 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Hmgb3O54879 Gm26570-201ENSMUST00000180672 342 ntBASIC5.62□□□□□ -1.51
Hmgb3O54879 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hmgb3O54879 Gm27542-201ENSMUST00000184184 256 ntBASIC5.62□□□□□ -1.51
Hmgb3O54879 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC5.62□□□□□ -1.51
Hmgb3O54879 Gm37225-201ENSMUST00000193423 325 ntBASIC5.62□□□□□ -1.51
Hmgb3O54879 Gm7542-201ENSMUST00000201140 777 ntBASIC5.62□□□□□ -1.51
Hmgb3O54879 Gm44712-201ENSMUST00000206250 1076 ntBASIC5.62□□□□□ -1.51
Hmgb3O54879 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC5.62□□□□□ -1.51
Hmgb3O54879 Gm46231-201ENSMUST00000220152 314 ntBASIC5.62□□□□□ -1.51
Hmgb3O54879 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC5.62□□□□□ -1.51
Hmgb3O54879 AV026068-229ENSMUST00000225516 595 ntBASIC5.62□□□□□ -1.51
Hmgb3O54879 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hmgb3O54879 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC5.62□□□□□ -1.51
Hmgb3O54879 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hmgb3O54879 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hmgb3O54879 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Hmgb3O54879 Gm10805-201ENSMUST00000099710 399 ntBASIC5.62□□□□□ -1.51
Hmgb3O54879 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hmgb3O54879 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hmgb3O54879 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hmgb3O54879 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC5.62□□□□□ -1.51
Hmgb3O54879 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.62□□□□□ -1.51
Hmgb3O54879 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC5.62□□□□□ -1.51
Hmgb3O54879 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC5.62□□□□□ -1.51
Hmgb3O54879 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Hmgb3O54879 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hmgb3O54879 AC156163.1-201ENSMUST00000215598 3369 ntBASIC5.62□□□□□ -1.51
Hmgb3O54879 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hmgb3O54879 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Hmgb3O54879 Gm26945-201ENSMUST00000183191 2011 ntBASIC5.62□□□□□ -1.51
Hmgb3O54879 Gm45061-201ENSMUST00000204395 2095 ntBASIC5.62□□□□□ -1.51
Hmgb3O54879 Gm2108-201ENSMUST00000165058 2177 ntBASIC5.62□□□□□ -1.51
Hmgb3O54879 Gm38381-201ENSMUST00000193594 2275 ntBASIC5.62□□□□□ -1.51
Hmgb3O54879 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hmgb3O54879 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Hmgb3O54879 Thap6-201ENSMUST00000191860 3151 ntBASIC5.61□□□□□ -1.51
Hmgb3O54879 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC5.61□□□□□ -1.51
Hmgb3O54879 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Hmgb3O54879 Gm25273-201ENSMUST00000104295 115 ntBASIC5.61□□□□□ -1.51
Hmgb3O54879 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Hmgb3O54879 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.61□□□□□ -1.51
Hmgb3O54879 Gm5915-201ENSMUST00000116136 454 ntBASIC5.61□□□□□ -1.51
Hmgb3O54879 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC5.61□□□□□ -1.51
Hmgb3O54879 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Hmgb3O54879 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Hmgb3O54879 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Hmgb3O54879 Gm22687-201ENSMUST00000158301 105 ntBASIC5.61□□□□□ -1.51
Hmgb3O54879 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC5.61□□□□□ -1.51
Hmgb3O54879 Gm8974-201ENSMUST00000175770 479 ntBASIC5.61□□□□□ -1.51
Hmgb3O54879 Six3os1-213ENSMUST00000177487 537 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Hmgb3O54879 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC5.61□□□□□ -1.51
Hmgb3O54879 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5.61□□□□□ -1.51
Hmgb3O54879 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC5.61□□□□□ -1.51
Hmgb3O54879 Gm8305-201ENSMUST00000180022 1195 ntBASIC5.61□□□□□ -1.51
Hmgb3O54879 Gm26436-201ENSMUST00000180325 132 ntBASIC5.61□□□□□ -1.51
Hmgb3O54879 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Hmgb3O54879 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Hmgb3O54879 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Hmgb3O54879 Gm28443-201ENSMUST00000189081 698 ntBASIC5.61□□□□□ -1.51
Hmgb3O54879 Gm28665-201ENSMUST00000189269 670 ntBASIC5.61□□□□□ -1.51
Hmgb3O54879 1700096J18Rik-201ENSMUST00000190043 482 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Hmgb3O54879 Gm37772-201ENSMUST00000191635 1394 ntBASIC5.61□□□□□ -1.51
Hmgb3O54879 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Hmgb3O54879 Gm43775-201ENSMUST00000201019 3395 ntBASIC5.61□□□□□ -1.51
Hmgb3O54879 Gm43699-201ENSMUST00000201312 818 ntTSL 3 BASIC5.61□□□□□ -1.51
Hmgb3O54879 Gm42959-201ENSMUST00000202184 212 ntBASIC5.61□□□□□ -1.51
Hmgb3O54879 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC5.61□□□□□ -1.51
Hmgb3O54879 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC5.61□□□□□ -1.51
Hmgb3O54879 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC5.61□□□□□ -1.51
Hmgb3O54879 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Hmgb3O54879 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Hmgb3O54879 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Hmgb3O54879 Mylf-ps-201ENSMUST00000222174 421 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms