Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Trim3Q9R1R2 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Trim3Q9R1R2 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Trim3Q9R1R2 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Trim3Q9R1R2 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 AC139941.2-201ENSMUST00000221565 1824 ntBASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Gm13130-201ENSMUST00000119195 1166 ntBASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Gm12920-201ENSMUST00000121818 1186 ntBASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Gm8305-201ENSMUST00000180022 1195 ntBASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Gm26607-201ENSMUST00000180661 867 ntBASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Gm27218-201ENSMUST00000183745 392 ntBASIC6.64□□□□□ -1.35
Trim3Q9R1R2 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Gm28416-201ENSMUST00000188334 292 ntBASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Gm7512-201ENSMUST00000195217 1170 ntBASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Ighv8-15-201ENSMUST00000197770 294 ntBASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC6.64□□□□□ -1.35
Trim3Q9R1R2 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Gm18226-201ENSMUST00000215261 521 ntBASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.64□□□□□ -1.35
Trim3Q9R1R2 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 n-R5s60-201ENSMUST00000083299 119 ntBASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Gm36527-201ENSMUST00000195500 3029 ntBASIC6.64□□□□□ -1.35
Trim3Q9R1R2 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim3Q9R1R2 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Gm42577-201ENSMUST00000201367 3211 ntBASIC6.63□□□□□ -1.35
Trim3Q9R1R2 AC126549.1-201ENSMUST00000225044 3687 ntBASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Gm14864-201ENSMUST00000116164 1087 ntBASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Gm11796-201ENSMUST00000120208 972 ntBASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Gm5809-201ENSMUST00000121854 529 ntBASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Gm2709-201ENSMUST00000142979 350 ntBASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Gm22915-201ENSMUST00000157615 136 ntBASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Gm16027-201ENSMUST00000161618 758 ntBASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Gm2108-201ENSMUST00000165058 2177 ntBASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Gm7481-201ENSMUST00000182020 995 ntBASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Gm37086-201ENSMUST00000193082 3452 ntBASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Gm5154-201ENSMUST00000203971 399 ntBASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Gm9240-201ENSMUST00000206527 742 ntBASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Gm40778-201ENSMUST00000217825 1344 ntBASIC6.63□□□□□ -1.35
Trim3Q9R1R2 CT009738.1-201ENSMUST00000219031 809 ntBASIC6.63□□□□□ -1.35
Trim3Q9R1R2 CT030166.4-201ENSMUST00000220640 404 ntBASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim3Q9R1R2 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms