Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 AC131033.1-201ENSMUST00000228223 279 ntBASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.57□□□□□ -1.36
Cdc40Q9DC48 AC122356.1-202ENSMUST00000227328 2758 ntBASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Gm18830-201ENSMUST00000199036 1396 ntBASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 AC105407.2-205ENSMUST00000224680 2733 ntBASIC6.56□□□□□ -1.36
Cdc40Q9DC48 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Gm38200-201ENSMUST00000192083 2111 ntBASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Gm42478-201ENSMUST00000199252 1467 ntBASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Gm37420-201ENSMUST00000195332 2912 ntBASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Gm13735-201ENSMUST00000120217 670 ntBASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Gm8305-201ENSMUST00000180022 1195 ntBASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Mir8094-201ENSMUST00000183361 117 ntBASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Mir7212-201ENSMUST00000184098 61 ntBASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Ighv1-29-201ENSMUST00000194116 342 ntBASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Gm43595-201ENSMUST00000196464 1071 ntBASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Gm43928-201ENSMUST00000203737 409 ntBASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 AC133948.2-201ENSMUST00000217850 378 ntBASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Gm2108-201ENSMUST00000165058 2177 ntBASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Gm10862-201ENSMUST00000193956 3350 ntBASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC6.56□□□□□ -1.36
Cdc40Q9DC48 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Gm37078-201ENSMUST00000193314 2009 ntBASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Gm29670-201ENSMUST00000190228 2491 ntBASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Gm7426-201ENSMUST00000179046 404 ntBASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Mir7084-201ENSMUST00000183876 70 ntBASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Gm28580-201ENSMUST00000186767 88 ntBASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Gm29383-201ENSMUST00000188284 480 ntBASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Gm38022-201ENSMUST00000191762 403 ntBASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Gm7341-201ENSMUST00000192183 926 ntBASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Gm44833-201ENSMUST00000208368 331 ntBASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Gm4247-201ENSMUST00000211441 1042 ntBASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 AC158954.1-201ENSMUST00000228272 1006 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms