Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 AC211878.5-201ENSMUST00000221697 409 ntBASIC6.89□□□□□ -1.31
Msh4Q99MT2 AC159205.2-201ENSMUST00000223759 816 ntBASIC6.89□□□□□ -1.31
Msh4Q99MT2 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Gm24919-201ENSMUST00000083020 106 ntBASIC6.89□□□□□ -1.31
Msh4Q99MT2 Gm25189-201ENSMUST00000083911 164 ntBASIC6.89□□□□□ -1.31
Msh4Q99MT2 Mir455-201ENSMUST00000093594 82 ntBASIC6.89□□□□□ -1.31
Msh4Q99MT2 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC6.89□□□□□ -1.31
Msh4Q99MT2 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Msh4Q99MT2 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Gm37078-201ENSMUST00000193314 2009 ntBASIC6.89□□□□□ -1.31
Msh4Q99MT2 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC6.89□□□□□ -1.31
Msh4Q99MT2 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Gm42577-201ENSMUST00000201367 3211 ntBASIC6.89□□□□□ -1.31
Msh4Q99MT2 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Msh4Q99MT2 AC124414.1-201ENSMUST00000218033 2946 ntBASIC6.88□□□□□ -1.31
Msh4Q99MT2 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Msh4Q99MT2 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Gm8276-201ENSMUST00000192231 1812 ntBASIC6.88□□□□□ -1.31
Msh4Q99MT2 Gm43168-201ENSMUST00000201039 1612 ntBASIC6.88□□□□□ -1.31
Msh4Q99MT2 AC166574.5-201ENSMUST00000227438 1432 ntBASIC6.88□□□□□ -1.31
Msh4Q99MT2 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Gm42885-201ENSMUST00000200763 4214 ntBASIC6.88□□□□□ -1.31
Msh4Q99MT2 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Gm11726-201ENSMUST00000121028 424 ntBASIC6.88□□□□□ -1.31
Msh4Q99MT2 Gm12754-201ENSMUST00000121908 454 ntBASIC6.88□□□□□ -1.31
Msh4Q99MT2 Gm24382-201ENSMUST00000122698 107 ntBASIC6.88□□□□□ -1.31
Msh4Q99MT2 Gm16330-201ENSMUST00000128324 297 ntBASIC6.88□□□□□ -1.31
Msh4Q99MT2 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Gm24442-201ENSMUST00000157238 327 ntBASIC6.88□□□□□ -1.31
Msh4Q99MT2 Gm17205-201ENSMUST00000168370 1207 ntBASIC6.88□□□□□ -1.31
Msh4Q99MT2 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Mir7058-201ENSMUST00000184637 75 ntBASIC6.88□□□□□ -1.31
Msh4Q99MT2 Gm27972-201ENSMUST00000184720 137 ntBASIC6.88□□□□□ -1.31
Msh4Q99MT2 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Gm5305-201ENSMUST00000204010 746 ntBASIC6.88□□□□□ -1.31
Msh4Q99MT2 Gm20136-201ENSMUST00000207501 891 ntBASIC6.88□□□□□ -1.31
Msh4Q99MT2 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Msh4Q99MT2 AC133948.2-201ENSMUST00000217850 378 ntBASIC6.88□□□□□ -1.31
Msh4Q99MT2 AC127224.1-201ENSMUST00000218094 453 ntBASIC6.88□□□□□ -1.31
Msh4Q99MT2 CT030166.4-201ENSMUST00000220640 404 ntBASIC6.88□□□□□ -1.31
Msh4Q99MT2 AC154361.1-201ENSMUST00000225694 745 ntBASIC6.88□□□□□ -1.31
Msh4Q99MT2 AC138604.2-201ENSMUST00000226620 921 ntBASIC6.88□□□□□ -1.31
Msh4Q99MT2 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Gm22865-201ENSMUST00000083949 214 ntBASIC6.88□□□□□ -1.31
Msh4Q99MT2 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Msh4Q99MT2 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC6.88□□□□□ -1.31
Msh4Q99MT2 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Msh4Q99MT2 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Msh4Q99MT2 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Msh4Q99MT2 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Msh4Q99MT2 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Msh4Q99MT2 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Msh4Q99MT2 Gm44231-201ENSMUST00000204106 4075 ntBASIC6.87□□□□□ -1.31
Msh4Q99MT2 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Msh4Q99MT2 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Msh4Q99MT2 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Msh4Q99MT2 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Msh4Q99MT2 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms