Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.9□□□□□ -1.31
Ccdc28bQ8CEG5 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Ccdc28bQ8CEG5 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Ccdc28bQ8CEG5 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Gm25608-201ENSMUST00000104021 132 ntBASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Mir669e-201ENSMUST00000117003 119 ntBASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Gm13878-201ENSMUST00000117986 577 ntBASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Gm13160-201ENSMUST00000118441 627 ntBASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Gm14631-201ENSMUST00000119067 594 ntBASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Gm13940-201ENSMUST00000121023 301 ntBASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Gm2735-201ENSMUST00000136133 277 ntBASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Gm9141-201ENSMUST00000159355 1007 ntBASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Gm4252-201ENSMUST00000174823 313 ntBASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Gm37225-201ENSMUST00000193423 325 ntBASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Gm43275-201ENSMUST00000202053 1020 ntBASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Gm44213-201ENSMUST00000204977 703 ntBASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 AC120002.1-201ENSMUST00000218456 331 ntBASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Gm18618-201ENSMUST00000222211 473 ntBASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 AC154324.1-201ENSMUST00000226711 814 ntBASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Gm5250-201ENSMUST00000059065 321 ntBASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Olfr1535-201ENSMUST00000068163 981 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Rpl27-ps3-201ENSMUST00000097682 475 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 AC107452.3-201ENSMUST00000228807 1308 ntBASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Gm45251-201ENSMUST00000209486 1465 ntBASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Ccdc28bQ8CEG5 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Tmem27-202ENSMUST00000112280 1389 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Gm6743-201ENSMUST00000117345 1066 ntBASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Gm15481-201ENSMUST00000120264 539 ntBASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Gm15187-201ENSMUST00000122329 264 ntBASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Gm12152-201ENSMUST00000122465 684 ntBASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Gm25116-201ENSMUST00000157191 122 ntBASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Gm22882-201ENSMUST00000157749 124 ntBASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Gm3326-201ENSMUST00000164656 1043 ntBASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Gm9451-201ENSMUST00000188491 604 ntBASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Gm5307-201ENSMUST00000204772 760 ntBASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Gm45478-201ENSMUST00000209472 211 ntBASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Gm19116-201ENSMUST00000218592 642 ntBASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Gm2915-201ENSMUST00000222565 787 ntBASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Gm23238-201ENSMUST00000083007 164 ntBASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
Ccdc28bQ8CEG5 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 120.7 ms