Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm44553-201ENSMUST00000206316 2037 ntBASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Gm12635-201ENSMUST00000117285 752 ntBASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Gm13137-201ENSMUST00000118035 345 ntBASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Gm12375-201ENSMUST00000119331 921 ntBASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Gm13438-201ENSMUST00000120100 573 ntBASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC8.26□□□□□ -1.09
Nup88Q8CEC0 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Gm22882-201ENSMUST00000157749 124 ntBASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Gm5261-201ENSMUST00000185860 713 ntBASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Gm38030-201ENSMUST00000192376 475 ntBASIC8.26□□□□□ -1.09
Nup88Q8CEC0 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Gm18752-201ENSMUST00000192876 608 ntBASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Gm43396-201ENSMUST00000197506 706 ntBASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Gm17833-201ENSMUST00000197629 1065 ntBASIC8.26□□□□□ -1.09
Nup88Q8CEC0 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Gm8479-201ENSMUST00000203825 718 ntBASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Gm44566-201ENSMUST00000207638 304 ntBASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Gm4247-201ENSMUST00000211441 1042 ntBASIC8.26□□□□□ -1.09
Nup88Q8CEC0 AC151971.2-201ENSMUST00000217540 909 ntBASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Gm18112-201ENSMUST00000219862 1195 ntBASIC8.26□□□□□ -1.09
Nup88Q8CEC0 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 AC108947.1-201ENSMUST00000224274 1000 ntBASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Gm23054-201ENSMUST00000082804 162 ntBASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 AC156636.1-201ENSMUST00000218639 2229 ntBASIC8.26□□□□□ -1.09
Nup88Q8CEC0 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Gm44704-201ENSMUST00000208963 1990 ntBASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Gm28667-201ENSMUST00000189873 2171 ntBASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Gm18830-201ENSMUST00000199036 1396 ntBASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Dennd6a-203ENSMUST00000224111 2692 ntBASIC8.25□□□□□ -1.09
Nup88Q8CEC0 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Gm14864-201ENSMUST00000116164 1087 ntBASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Gm14745-201ENSMUST00000118480 1096 ntBASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Gm11320-201ENSMUST00000119434 463 ntBASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Gm12477-201ENSMUST00000121221 571 ntBASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Gm16357-201ENSMUST00000144091 474 ntBASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Gm6264-201ENSMUST00000160802 624 ntBASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Gm3208-201ENSMUST00000168281 427 ntBASIC8.25□□□□□ -1.09
Nup88Q8CEC0 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Gm8305-201ENSMUST00000180022 1195 ntBASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Gm27178-201ENSMUST00000184962 340 ntBASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Gm37328-201ENSMUST00000193191 640 ntBASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Gm5050-201ENSMUST00000197164 775 ntBASIC8.25□□□□□ -1.09
Nup88Q8CEC0 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Nup88Q8CEC0 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Gm42963-201ENSMUST00000202943 1217 ntBASIC8.25□□□□□ -1.09
Nup88Q8CEC0 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC8.25□□□□□ -1.09
Nup88Q8CEC0 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Gm31711-201ENSMUST00000220687 196 ntBASIC8.25□□□□□ -1.09
Nup88Q8CEC0 AC133598.3-204ENSMUST00000224260 767 ntBASIC8.25□□□□□ -1.09
Nup88Q8CEC0 CT009527.2-201ENSMUST00000225386 606 ntBASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Nup88Q8CEC0 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Nup88Q8CEC0 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Nup88Q8CEC0 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Nup88Q8CEC0 Gm37877-201ENSMUST00000191630 2709 ntBASIC8.24□□□□□ -1.09
Nup88Q8CEC0 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC8.24□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms