Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm29189-201ENSMUST00000188018 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm29476-201ENSMUST00000188397 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm29505-201ENSMUST00000188424 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm28125-201ENSMUST00000188470 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm29391-201ENSMUST00000188545 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm29280-201ENSMUST00000188571 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm28349-201ENSMUST00000188590 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm29652-201ENSMUST00000188622 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm28819-206ENSMUST00000188816 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm29079-201ENSMUST00000188875 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm28213-201ENSMUST00000189183 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm29382-201ENSMUST00000189549 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm29377-205ENSMUST00000189603 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm28327-201ENSMUST00000189638 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm28790-201ENSMUST00000189642 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm28907-201ENSMUST00000189700 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm29586-207ENSMUST00000189745 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm29115-201ENSMUST00000189870 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm28366-201ENSMUST00000190147 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm29212-201ENSMUST00000190384 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm29533-201ENSMUST00000190403 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm28162-201ENSMUST00000190545 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm29030-201ENSMUST00000190848 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm28742-201ENSMUST00000191001 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm28899-201ENSMUST00000191161 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm29567-201ENSMUST00000191188 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm28222-201ENSMUST00000191210 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm28776-201ENSMUST00000191282 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm29306-201ENSMUST00000191366 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm29618-201ENSMUST00000191423 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm28136-210ENSMUST00000191432 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm29251-201ENSMUST00000191480 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm28658-201ENSMUST00000191532 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm32180-201ENSMUST00000192415 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm30598-201ENSMUST00000192620 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm37627-201ENSMUST00000194585 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm34274-201ENSMUST00000195825 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm5446-201ENSMUST00000091762 784 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm42885-201ENSMUST00000200763 4214 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm37534-201ENSMUST00000194483 5222 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm37151-201ENSMUST00000194631 5007 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm38200-201ENSMUST00000192083 2111 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm13877-201ENSMUST00000120614 417 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm15316-201ENSMUST00000121082 421 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm15242-201ENSMUST00000122459 283 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm25717-201ENSMUST00000158631 353 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm27001-201ENSMUST00000182252 936 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28739-201ENSMUST00000185415 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28219-201ENSMUST00000185452 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28542-201ENSMUST00000185545 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28303-201ENSMUST00000185642 747 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm29244-201ENSMUST00000185825 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm29437-201ENSMUST00000185865 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm29412-201ENSMUST00000185869 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28910-201ENSMUST00000185921 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28812-201ENSMUST00000185963 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm29468-201ENSMUST00000185978 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28335-201ENSMUST00000186204 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28854-201ENSMUST00000186218 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28636-201ENSMUST00000186353 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28452-201ENSMUST00000186623 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm29298-201ENSMUST00000186704 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28185-201ENSMUST00000186815 694 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28227-201ENSMUST00000186862 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28796-201ENSMUST00000186905 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm29659-201ENSMUST00000187063 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28473-201ENSMUST00000187325 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28558-201ENSMUST00000187373 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28682-201ENSMUST00000187430 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28738-201ENSMUST00000187480 696 ntBASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms