Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Gm6581-201ENSMUST00000214545 260 ntBASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Gm18591-201ENSMUST00000220568 763 ntBASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 AC159205.1-201ENSMUST00000225513 1099 ntBASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 AC139209.2-201ENSMUST00000227680 1208 ntBASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 AC154838.3-201ENSMUST00000228876 965 ntBASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Gm15500-201ENSMUST00000071523 894 ntBASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Gm20900-201ENSMUST00000078729 472 ntBASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Gm38178-201ENSMUST00000194502 2471 ntBASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Gm37248-201ENSMUST00000193576 3174 ntBASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Gm10555-201ENSMUST00000193178 1791 ntBASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Gm42727-201ENSMUST00000202446 2823 ntBASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Gm37382-201ENSMUST00000193032 1596 ntBASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Gm6746-201ENSMUST00000108774 483 ntBASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Gm25770-201ENSMUST00000158566 115 ntBASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Gm8305-201ENSMUST00000180022 1195 ntBASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Gm26738-201ENSMUST00000181312 601 ntBASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Mir8094-201ENSMUST00000183361 117 ntBASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Gm18254-201ENSMUST00000185699 1204 ntBASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Gm20813-201ENSMUST00000186646 705 ntBASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Gm21923-201ENSMUST00000188455 696 ntBASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Klra13-ps-203ENSMUST00000204367 850 ntBASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Gm18112-201ENSMUST00000219862 1195 ntBASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 AC172989.1-201ENSMUST00000226387 513 ntBASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 AC158954.1-201ENSMUST00000228272 1006 ntBASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Gm24924-201ENSMUST00000084007 164 ntBASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ccdc40Q8BI79 Gm2108-201ENSMUST00000165058 2177 ntBASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Gm3555-201ENSMUST00000160287 1395 ntBASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Gm38009-201ENSMUST00000194884 3341 ntBASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Gm25614-201ENSMUST00000104013 133 ntBASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Gm11880-201ENSMUST00000117612 399 ntBASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Gm11485-201ENSMUST00000120048 1175 ntBASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Defa-ps10-201ENSMUST00000121649 171 ntBASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Gm7426-201ENSMUST00000179046 404 ntBASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Gm5244-202ENSMUST00000189517 743 ntBASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Gm38022-201ENSMUST00000191762 403 ntBASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Gm7341-201ENSMUST00000192183 926 ntBASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Gm37322-201ENSMUST00000193409 337 ntBASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Gm42932-201ENSMUST00000197280 744 ntBASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms