Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ClpbQ60649 Gm2531-201ENSMUST00000075609 512 ntBASIC6.82□□□□□ -1.32
ClpbQ60649 Gm22865-201ENSMUST00000083949 214 ntBASIC6.82□□□□□ -1.32
ClpbQ60649 Gm42577-201ENSMUST00000201367 3211 ntBASIC6.82□□□□□ -1.32
ClpbQ60649 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC6.82□□□□□ -1.32
ClpbQ60649 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
ClpbQ60649 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
ClpbQ60649 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.82□□□□□ -1.32
ClpbQ60649 Gm26945-201ENSMUST00000183191 2011 ntBASIC6.82□□□□□ -1.32
ClpbQ60649 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
ClpbQ60649 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ClpbQ60649 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ClpbQ60649 Gm36930-201ENSMUST00000195431 2376 ntBASIC6.82□□□□□ -1.32
ClpbQ60649 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
ClpbQ60649 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
ClpbQ60649 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
ClpbQ60649 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
ClpbQ60649 Sec24c-202ENSMUST00000223751 4196 ntBASIC6.82□□□□□ -1.32
ClpbQ60649 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
ClpbQ60649 AC138284.1-201ENSMUST00000214258 3236 ntBASIC6.82□□□□□ -1.32
ClpbQ60649 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
ClpbQ60649 Gm18830-201ENSMUST00000199036 1396 ntBASIC6.82□□□□□ -1.32
ClpbQ60649 AC154522.1-201ENSMUST00000224647 1903 ntBASIC6.82□□□□□ -1.32
ClpbQ60649 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
ClpbQ60649 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ClpbQ60649 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ClpbQ60649 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
ClpbQ60649 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
ClpbQ60649 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
ClpbQ60649 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ClpbQ60649 Gm42763-201ENSMUST00000199595 2087 ntBASIC6.81□□□□□ -1.32
ClpbQ60649 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
ClpbQ60649 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
ClpbQ60649 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
ClpbQ60649 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
ClpbQ60649 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ClpbQ60649 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ClpbQ60649 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ClpbQ60649 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ClpbQ60649 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
ClpbQ60649 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ClpbQ60649 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
ClpbQ60649 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
ClpbQ60649 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
ClpbQ60649 Gm13744-201ENSMUST00000118953 850 ntBASIC6.81□□□□□ -1.32
ClpbQ60649 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC6.81□□□□□ -1.32
ClpbQ60649 Gm21182-201ENSMUST00000178899 794 ntBASIC6.81□□□□□ -1.32
ClpbQ60649 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
ClpbQ60649 Gm26738-201ENSMUST00000181312 601 ntBASIC6.81□□□□□ -1.32
ClpbQ60649 Gm8524-201ENSMUST00000186232 379 ntBASIC6.81□□□□□ -1.32
ClpbQ60649 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC6.81□□□□□ -1.32
ClpbQ60649 Gm28070-201ENSMUST00000191502 445 ntBASIC6.81□□□□□ -1.32
ClpbQ60649 Trbv9-201ENSMUST00000194494 290 ntBASIC6.81□□□□□ -1.32
ClpbQ60649 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC6.81□□□□□ -1.32
ClpbQ60649 Gm9419-201ENSMUST00000200672 567 ntBASIC6.81□□□□□ -1.32
ClpbQ60649 Gm42734-201ENSMUST00000201656 878 ntBASIC6.81□□□□□ -1.32
ClpbQ60649 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC6.81□□□□□ -1.32
ClpbQ60649 Gm44722-201ENSMUST00000206473 436 ntBASIC6.81□□□□□ -1.32
ClpbQ60649 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC6.81□□□□□ -1.32
ClpbQ60649 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
ClpbQ60649 Gm45497-201ENSMUST00000211701 740 ntBASIC6.81□□□□□ -1.32
ClpbQ60649 Gm19007-201ENSMUST00000217746 874 ntBASIC6.81□□□□□ -1.32
ClpbQ60649 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC6.81□□□□□ -1.32
ClpbQ60649 AC159205.2-201ENSMUST00000223759 816 ntBASIC6.81□□□□□ -1.32
ClpbQ60649 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
ClpbQ60649 Gm25189-201ENSMUST00000083911 164 ntBASIC6.81□□□□□ -1.32
ClpbQ60649 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
ClpbQ60649 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.81□□□□□ -1.32
ClpbQ60649 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ClpbQ60649 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
ClpbQ60649 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
ClpbQ60649 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
ClpbQ60649 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ClpbQ60649 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC6.81□□□□□ -1.32
ClpbQ60649 Gm19801-201ENSMUST00000218231 1882 ntBASIC6.81□□□□□ -1.32
ClpbQ60649 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
ClpbQ60649 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ClpbQ60649 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
ClpbQ60649 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ClpbQ60649 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
ClpbQ60649 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
ClpbQ60649 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
ClpbQ60649 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ClpbQ60649 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
ClpbQ60649 Gm45793-201ENSMUST00000207900 1342 ntBASIC6.8□□□□□ -1.32
ClpbQ60649 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ClpbQ60649 AC091783.1-201ENSMUST00000223614 1613 ntBASIC6.8□□□□□ -1.32
ClpbQ60649 Gm45201-201ENSMUST00000207187 2679 ntBASIC6.8□□□□□ -1.32
ClpbQ60649 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ClpbQ60649 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC6.8□□□□□ -1.32
ClpbQ60649 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
ClpbQ60649 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
ClpbQ60649 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
ClpbQ60649 Gm13006-201ENSMUST00000118683 214 ntBASIC6.8□□□□□ -1.32
ClpbQ60649 Gm15484-201ENSMUST00000118871 828 ntBASIC6.8□□□□□ -1.32
ClpbQ60649 Gm11320-201ENSMUST00000119434 463 ntBASIC6.8□□□□□ -1.32
ClpbQ60649 Gm15188-201ENSMUST00000121264 704 ntBASIC6.8□□□□□ -1.32
ClpbQ60649 Gm14990-201ENSMUST00000122354 445 ntBASIC6.8□□□□□ -1.32
ClpbQ60649 Gm22024-201ENSMUST00000122733 287 ntBASIC6.8□□□□□ -1.32
ClpbQ60649 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms