Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC8.13□□□□□ -1.11
Hmgb1P63158 Gm4252-201ENSMUST00000174823 313 ntBASIC8.13□□□□□ -1.11
Hmgb1P63158 Zfp572-202ENSMUST00000184208 1078 ntBASIC8.13□□□□□ -1.11
Hmgb1P63158 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb1P63158 I830127L07Rik-202ENSMUST00000190944 405 ntBASIC8.13□□□□□ -1.11
Hmgb1P63158 Gm19175-201ENSMUST00000199895 916 ntBASIC8.13□□□□□ -1.11
Hmgb1P63158 Gm43906-201ENSMUST00000203194 906 ntBASIC8.13□□□□□ -1.11
Hmgb1P63158 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC8.13□□□□□ -1.11
Hmgb1P63158 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC8.13□□□□□ -1.11
Hmgb1P63158 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC8.13□□□□□ -1.11
Hmgb1P63158 AC154335.1-201ENSMUST00000224744 395 ntBASIC8.13□□□□□ -1.11
Hmgb1P63158 AC154627.1-201ENSMUST00000228799 1286 ntBASIC8.13□□□□□ -1.11
Hmgb1P63158 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Hmgb1P63158 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Hmgb1P63158 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Hmgb1P63158 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb1P63158 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb1P63158 Gm23623-201ENSMUST00000082461 107 ntBASIC8.13□□□□□ -1.11
Hmgb1P63158 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb1P63158 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb1P63158 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb1P63158 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb1P63158 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb1P63158 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb1P63158 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb1P63158 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Hmgb1P63158 Gm37717-201ENSMUST00000192647 3027 ntBASIC8.13□□□□□ -1.11
Hmgb1P63158 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Hmgb1P63158 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Hmgb1P63158 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC8.13□□□□□ -1.11
Hmgb1P63158 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb1P63158 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb1P63158 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC8.12□□□□□ -1.11
Hmgb1P63158 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb1P63158 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb1P63158 Gm45221-201ENSMUST00000207822 2272 ntBASIC8.12□□□□□ -1.11
Hmgb1P63158 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Hmgb1P63158 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Hmgb1P63158 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC8.12□□□□□ -1.11
Hmgb1P63158 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb1P63158 Gm22687-201ENSMUST00000158301 105 ntBASIC8.12□□□□□ -1.11
Hmgb1P63158 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb1P63158 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Hmgb1P63158 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC8.12□□□□□ -1.11
Hmgb1P63158 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Hmgb1P63158 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC8.12□□□□□ -1.11
Hmgb1P63158 Gm7631-201ENSMUST00000196935 1100 ntBASIC8.12□□□□□ -1.11
Hmgb1P63158 Gm7285-201ENSMUST00000198801 580 ntBASIC8.12□□□□□ -1.11
Hmgb1P63158 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC8.12□□□□□ -1.11
Hmgb1P63158 Gm7478-201ENSMUST00000201054 581 ntBASIC8.12□□□□□ -1.11
Hmgb1P63158 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb1P63158 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC8.12□□□□□ -1.11
Hmgb1P63158 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC8.12□□□□□ -1.11
Hmgb1P63158 Gm7439-201ENSMUST00000214053 835 ntBASIC8.12□□□□□ -1.11
Hmgb1P63158 Gm18292-201ENSMUST00000216673 919 ntBASIC8.12□□□□□ -1.11
Hmgb1P63158 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC8.12□□□□□ -1.11
Hmgb1P63158 AC131117.2-203ENSMUST00000225886 950 ntBASIC8.12□□□□□ -1.11
Hmgb1P63158 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb1P63158 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb1P63158 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Hmgb1P63158 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC8.12□□□□□ -1.11
Hmgb1P63158 Gm16391-201ENSMUST00000086601 447 ntBASIC8.12□□□□□ -1.11
Hmgb1P63158 Olfr742-201ENSMUST00000089836 1120 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Hmgb1P63158 Rpl27-ps3-201ENSMUST00000097682 475 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Hmgb1P63158 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb1P63158 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb1P63158 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb1P63158 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Hmgb1P63158 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb1P63158 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb1P63158 Gm28583-201ENSMUST00000188903 2141 ntBASIC8.12□□□□□ -1.11
Hmgb1P63158 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Hmgb1P63158 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb1P63158 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb1P63158 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb1P63158 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC8.12□□□□□ -1.11
Hmgb1P63158 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Hmgb1P63158 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb1P63158 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Hmgb1P63158 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Hmgb1P63158 Gm2223-201ENSMUST00000112099 1350 ntBASIC8.11□□□□□ -1.11
Hmgb1P63158 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Hmgb1P63158 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Hmgb1P63158 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Hmgb1P63158 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
Hmgb1P63158 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Hmgb1P63158 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Hmgb1P63158 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Hmgb1P63158 Mir704-201ENSMUST00000102106 77 ntBASIC8.11□□□□□ -1.11
Hmgb1P63158 Ighv1-82-201ENSMUST00000103549 294 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Hmgb1P63158 Gm22438-201ENSMUST00000104049 132 ntBASIC8.11□□□□□ -1.11
Hmgb1P63158 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Hmgb1P63158 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Hmgb1P63158 Gm14202-201ENSMUST00000120121 311 ntBASIC8.11□□□□□ -1.11
Hmgb1P63158 Gm15730-201ENSMUST00000121828 415 ntBASIC8.11□□□□□ -1.11
Hmgb1P63158 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC8.11□□□□□ -1.11
Hmgb1P63158 Gm25845-201ENSMUST00000122588 310 ntBASIC8.11□□□□□ -1.11
Hmgb1P63158 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Hmgb1P63158 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC8.11□□□□□ -1.11
Hmgb1P63158 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms