Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm5300-201ENSMUST00000182201 1003 ntBASIC6.32□□□□□ -1.4
Rfx3P48381 Gm28894-201ENSMUST00000185214 615 ntBASIC6.32□□□□□ -1.4
Rfx3P48381 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Rfx3P48381 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx3P48381 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Rfx3P48381 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC6.32□□□□□ -1.4
Rfx3P48381 Gm37369-201ENSMUST00000194179 615 ntBASIC6.32□□□□□ -1.4
Rfx3P48381 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx3P48381 Gm30708-201ENSMUST00000202183 312 ntBASIC6.32□□□□□ -1.4
Rfx3P48381 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC6.32□□□□□ -1.4
Rfx3P48381 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC6.32□□□□□ -1.4
Rfx3P48381 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx3P48381 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.32□□□□□ -1.4
Rfx3P48381 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC6.32□□□□□ -1.4
Rfx3P48381 AC139209.2-201ENSMUST00000227680 1208 ntBASIC6.32□□□□□ -1.4
Rfx3P48381 AC154838.3-201ENSMUST00000228876 965 ntBASIC6.32□□□□□ -1.4
Rfx3P48381 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Rfx3P48381 Gm2840-201ENSMUST00000048361 411 ntBASIC6.32□□□□□ -1.4
Rfx3P48381 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Rfx3P48381 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Rfx3P48381 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx3P48381 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx3P48381 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC6.32□□□□□ -1.4
Rfx3P48381 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx3P48381 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx3P48381 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx3P48381 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx3P48381 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx3P48381 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx3P48381 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Rfx3P48381 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx3P48381 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx3P48381 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx3P48381 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx3P48381 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Rfx3P48381 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx3P48381 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx3P48381 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.31□□□□□ -1.4
Rfx3P48381 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC6.31□□□□□ -1.4
Rfx3P48381 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC6.31□□□□□ -1.4
Rfx3P48381 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Rfx3P48381 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Rfx3P48381 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC6.31□□□□□ -1.4
Rfx3P48381 Gm17184-201ENSMUST00000111864 462 ntBASIC6.31□□□□□ -1.4
Rfx3P48381 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.31□□□□□ -1.4
Rfx3P48381 Gm15203-201ENSMUST00000117668 455 ntBASIC6.31□□□□□ -1.4
Rfx3P48381 Gm14248-201ENSMUST00000117790 544 ntBASIC6.31□□□□□ -1.4
Rfx3P48381 Gm15158-201ENSMUST00000120577 570 ntBASIC6.31□□□□□ -1.4
Rfx3P48381 Gm14251-201ENSMUST00000122133 279 ntBASIC6.31□□□□□ -1.4
Rfx3P48381 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
Rfx3P48381 Gm4613-201ENSMUST00000165488 276 ntBASIC6.31□□□□□ -1.4
Rfx3P48381 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Rfx3P48381 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx3P48381 Gm28114-201ENSMUST00000187232 379 ntBASIC6.31□□□□□ -1.4
Rfx3P48381 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx3P48381 Gm7341-201ENSMUST00000192183 926 ntBASIC6.31□□□□□ -1.4
Rfx3P48381 Gm3103-201ENSMUST00000198073 752 ntBASIC6.31□□□□□ -1.4
Rfx3P48381 Gm43812-202ENSMUST00000202701 581 ntBASIC6.31□□□□□ -1.4
Rfx3P48381 Gm44252-201ENSMUST00000204187 330 ntBASIC6.31□□□□□ -1.4
Rfx3P48381 Gm43905-201ENSMUST00000204516 204 ntBASIC6.31□□□□□ -1.4
Rfx3P48381 Gm44979-201ENSMUST00000206218 287 ntBASIC6.31□□□□□ -1.4
Rfx3P48381 Gm44943-201ENSMUST00000207254 300 ntBASIC6.31□□□□□ -1.4
Rfx3P48381 Gm8804-201ENSMUST00000212292 798 ntBASIC6.31□□□□□ -1.4
Rfx3P48381 Gm34424-201ENSMUST00000213400 782 ntBASIC6.31□□□□□ -1.4
Rfx3P48381 Gm6581-201ENSMUST00000214545 260 ntBASIC6.31□□□□□ -1.4
Rfx3P48381 AC160338.3-201ENSMUST00000214836 384 ntBASIC6.31□□□□□ -1.4
Rfx3P48381 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.31□□□□□ -1.4
Rfx3P48381 AC118006.3-201ENSMUST00000223948 1176 ntBASIC6.31□□□□□ -1.4
Rfx3P48381 Vmn1r41-202ENSMUST00000226337 888 ntBASIC6.31□□□□□ -1.4
Rfx3P48381 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC6.31□□□□□ -1.4
Rfx3P48381 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx3P48381 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Rfx3P48381 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
Rfx3P48381 Gm22504-201ENSMUST00000082963 139 ntBASIC6.31□□□□□ -1.4
Rfx3P48381 Gm16020-201ENSMUST00000084281 210 ntBASIC6.31□□□□□ -1.4
Rfx3P48381 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx3P48381 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx3P48381 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx3P48381 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx3P48381 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Rfx3P48381 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx3P48381 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx3P48381 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx3P48381 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx3P48381 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
Rfx3P48381 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx3P48381 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx3P48381 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.31□□□□□ -1.4
Rfx3P48381 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Rfx3P48381 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx3P48381 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx3P48381 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Rfx3P48381 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx3P48381 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Rfx3P48381 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.3□□□□□ -1.4
Rfx3P48381 Gm44121-201ENSMUST00000205169 2006 ntBASIC6.3□□□□□ -1.4
Rfx3P48381 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Rfx3P48381 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Rfx3P48381 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Rfx3P48381 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms