Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Gm38381-201ENSMUST00000193594 2275 ntBASIC6.65□□□□□ -1.34
Tnfsf4P43488 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Gm11954-201ENSMUST00000121403 349 ntBASIC6.65□□□□□ -1.34
Tnfsf4P43488 Gm12630-201ENSMUST00000121575 784 ntBASIC6.65□□□□□ -1.34
Tnfsf4P43488 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC6.65□□□□□ -1.34
Tnfsf4P43488 Gm6610-201ENSMUST00000186324 358 ntBASIC6.65□□□□□ -1.34
Tnfsf4P43488 Gm28117-201ENSMUST00000188472 371 ntBASIC6.65□□□□□ -1.34
Tnfsf4P43488 Ighv1-38-201ENSMUST00000192755 349 ntBASIC6.65□□□□□ -1.34
Tnfsf4P43488 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Gm18430-201ENSMUST00000197534 682 ntBASIC6.65□□□□□ -1.34
Tnfsf4P43488 Gm44044-201ENSMUST00000205178 1089 ntBASIC6.65□□□□□ -1.34
Tnfsf4P43488 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Gm45756-201ENSMUST00000212491 407 ntBASIC6.65□□□□□ -1.34
Tnfsf4P43488 AC154747.4-201ENSMUST00000224802 903 ntBASIC6.65□□□□□ -1.34
Tnfsf4P43488 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.65□□□□□ -1.34
Tnfsf4P43488 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Gm7731-201ENSMUST00000091759 470 ntBASIC6.65□□□□□ -1.34
Tnfsf4P43488 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Tnfsf4P43488 Gm19024-201ENSMUST00000194681 1319 ntBASIC6.65□□□□□ -1.35
Tnfsf4P43488 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Tnfsf4P43488 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Tnfsf4P43488 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.65□□□□□ -1.35
Tnfsf4P43488 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Tnfsf4P43488 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC6.65□□□□□ -1.35
Tnfsf4P43488 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Tnfsf4P43488 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Tnfsf4P43488 Gm10601-201ENSMUST00000120436 1422 ntBASIC6.65□□□□□ -1.35
Tnfsf4P43488 Gm43421-201ENSMUST00000200044 2905 ntBASIC6.65□□□□□ -1.35
Tnfsf4P43488 CT030185.1-201ENSMUST00000222940 2289 ntBASIC6.65□□□□□ -1.35
Tnfsf4P43488 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC6.65□□□□□ -1.35
Tnfsf4P43488 AC129308.2-203ENSMUST00000224109 2385 ntBASIC6.65□□□□□ -1.35
Tnfsf4P43488 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Tnfsf4P43488 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Tnfsf4P43488 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.64□□□□□ -1.35
Tnfsf4P43488 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Tnfsf4P43488 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.64□□□□□ -1.35
Tnfsf4P43488 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Tnfsf4P43488 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.64□□□□□ -1.35
Tnfsf4P43488 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC6.64□□□□□ -1.35
Tnfsf4P43488 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Tnfsf4P43488 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Tnfsf4P43488 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.64□□□□□ -1.35
Tnfsf4P43488 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Tnfsf4P43488 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Tnfsf4P43488 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Tnfsf4P43488 Gm14550-201ENSMUST00000117918 407 ntBASIC6.64□□□□□ -1.35
Tnfsf4P43488 Gm15712-201ENSMUST00000120369 1156 ntBASIC6.64□□□□□ -1.35
Tnfsf4P43488 Gm15362-201ENSMUST00000121459 388 ntBASIC6.64□□□□□ -1.35
Tnfsf4P43488 Gm24286-201ENSMUST00000157632 128 ntBASIC6.64□□□□□ -1.35
Tnfsf4P43488 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC6.64□□□□□ -1.35
Tnfsf4P43488 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC6.64□□□□□ -1.35
Tnfsf4P43488 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.64□□□□□ -1.35
Tnfsf4P43488 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC6.64□□□□□ -1.35
Tnfsf4P43488 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC6.64□□□□□ -1.35
Tnfsf4P43488 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC6.64□□□□□ -1.35
Tnfsf4P43488 Gm3841-201ENSMUST00000191399 451 ntBASIC6.64□□□□□ -1.35
Tnfsf4P43488 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Tnfsf4P43488 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC6.64□□□□□ -1.35
Tnfsf4P43488 Gm37585-201ENSMUST00000195440 280 ntBASIC6.64□□□□□ -1.35
Tnfsf4P43488 Gm43013-201ENSMUST00000198216 247 ntBASIC6.64□□□□□ -1.35
Tnfsf4P43488 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC6.64□□□□□ -1.35
Tnfsf4P43488 Gm30708-201ENSMUST00000202183 312 ntBASIC6.64□□□□□ -1.35
Tnfsf4P43488 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC6.64□□□□□ -1.35
Tnfsf4P43488 Gm44565-201ENSMUST00000208194 269 ntBASIC6.64□□□□□ -1.35
Tnfsf4P43488 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC6.64□□□□□ -1.35
Tnfsf4P43488 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC6.64□□□□□ -1.35
Tnfsf4P43488 AC151971.2-201ENSMUST00000217540 909 ntBASIC6.64□□□□□ -1.35
Tnfsf4P43488 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.64□□□□□ -1.35
Tnfsf4P43488 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Tnfsf4P43488 AC159205.1-201ENSMUST00000225513 1099 ntBASIC6.64□□□□□ -1.35
Tnfsf4P43488 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Tnfsf4P43488 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC6.64□□□□□ -1.35
Tnfsf4P43488 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Tnfsf4P43488 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Tnfsf4P43488 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC6.64□□□□□ -1.35
Tnfsf4P43488 Gm5605-201ENSMUST00000208940 1305 ntBASIC6.64□□□□□ -1.35
Tnfsf4P43488 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms