Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
HttP42859 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
HttP42859 Robo2-201ENSMUST00000116586 4764 ntTSL 5 BASIC7.13□□□□□ -1.27
HttP42859 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HttP42859 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
HttP42859 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
HttP42859 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HttP42859 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC7.13□□□□□ -1.27
HttP42859 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
HttP42859 Col4a5-201ENSMUST00000112930 6285 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HttP42859 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HttP42859 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HttP42859 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
HttP42859 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HttP42859 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HttP42859 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
HttP42859 Mir5103-201ENSMUST00000175111 79 ntBASIC7.12□□□□□ -1.27
HttP42859 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HttP42859 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC7.12□□□□□ -1.27
HttP42859 Gm7463-201ENSMUST00000201541 547 ntBASIC7.12□□□□□ -1.27
HttP42859 Gm17988-201ENSMUST00000208796 535 ntBASIC7.12□□□□□ -1.27
HttP42859 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC7.12□□□□□ -1.27
HttP42859 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC7.12□□□□□ -1.27
HttP42859 Gm43681-201ENSMUST00000201581 1903 ntBASIC7.12□□□□□ -1.27
HttP42859 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HttP42859 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
HttP42859 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
HttP42859 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
HttP42859 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HttP42859 Aldh1l1-203ENSMUST00000130418 4175 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HttP42859 Sntg1-207ENSMUST00000140295 4887 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HttP42859 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
HttP42859 Gm44916-201ENSMUST00000208664 2194 ntBASIC7.12□□□□□ -1.27
HttP42859 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC7.12□□□□□ -1.27
HttP42859 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC7.12□□□□□ -1.27
HttP42859 Gm23343-201ENSMUST00000158964 143 ntBASIC7.12□□□□□ -1.27
HttP42859 Gm3307-201ENSMUST00000176164 632 ntBASIC7.12□□□□□ -1.27
HttP42859 Gm45127-201ENSMUST00000205984 1015 ntBASIC7.12□□□□□ -1.27
HttP42859 Gm18914-201ENSMUST00000214625 616 ntBASIC7.12□□□□□ -1.27
HttP42859 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HttP42859 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HttP42859 Olfr1350-202ENSMUST00000207221 1521 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
HttP42859 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
HttP42859 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
HttP42859 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HttP42859 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HttP42859 Aoc3-202ENSMUST00000103105 4397 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HttP42859 Itgam-203ENSMUST00000106242 4649 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
HttP42859 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HttP42859 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC7.12□□□□□ -1.27
HttP42859 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HttP42859 Gm19031-201ENSMUST00000176280 1365 ntBASIC7.12□□□□□ -1.27
HttP42859 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC7.12□□□□□ -1.27
HttP42859 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC7.12□□□□□ -1.27
HttP42859 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC7.12□□□□□ -1.27
HttP42859 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HttP42859 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HttP42859 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
HttP42859 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HttP42859 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HttP42859 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
HttP42859 AC154176.2-201ENSMUST00000225376 6429 ntBASIC7.11□□□□□ -1.27
HttP42859 Gm45407-201ENSMUST00000209499 3676 ntBASIC7.11□□□□□ -1.27
HttP42859 Nsd2-201ENSMUST00000058096 4633 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
HttP42859 Ammecr1l-201ENSMUST00000115808 4769 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HttP42859 Gm15011-201ENSMUST00000117724 1480 ntBASIC7.11□□□□□ -1.27
HttP42859 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HttP42859 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HttP42859 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
HttP42859 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
HttP42859 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HttP42859 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HttP42859 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HttP42859 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HttP42859 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HttP42859 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HttP42859 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC7.11□□□□□ -1.27
HttP42859 Gm25537-201ENSMUST00000103851 109 ntBASIC7.11□□□□□ -1.27
HttP42859 Gm22272-201ENSMUST00000104039 134 ntBASIC7.11□□□□□ -1.27
HttP42859 Gm13033-201ENSMUST00000117591 1057 ntBASIC7.11□□□□□ -1.27
HttP42859 Gm14613-201ENSMUST00000122239 752 ntBASIC7.11□□□□□ -1.27
HttP42859 Gm22275-201ENSMUST00000122470 310 ntBASIC7.11□□□□□ -1.27
HttP42859 n-R5s19-201ENSMUST00000122793 120 ntBASIC7.11□□□□□ -1.27
HttP42859 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC7.11□□□□□ -1.27
HttP42859 Gm44823-201ENSMUST00000204775 1107 ntBASIC7.11□□□□□ -1.27
HttP42859 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC7.11□□□□□ -1.27
HttP42859 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
HttP42859 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HttP42859 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HttP42859 Dgkh-204ENSMUST00000227767 3319 ntBASIC7.11□□□□□ -1.27
HttP42859 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
HttP42859 Gm37962-201ENSMUST00000195535 2034 ntBASIC7.11□□□□□ -1.27
HttP42859 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HttP42859 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC7.11□□□□□ -1.27
HttP42859 Aph1b-201ENSMUST00000034934 4910 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HttP42859 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HttP42859 Gm20486-201ENSMUST00000101544 128 ntBASIC7.11□□□□□ -1.27
HttP42859 Gm4789-201ENSMUST00000121708 1216 ntBASIC7.11□□□□□ -1.27
HttP42859 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC7.11□□□□□ -1.27
HttP42859 Gm22596-201ENSMUST00000157601 316 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 118.9 ms