Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm35108-201ENSMUST00000194321 699 ntBASIC6.21□□□□□ -1.42
P20040 Gm38079-201ENSMUST00000195603 154 ntBASIC6.21□□□□□ -1.42
P20040 Gm33191-201ENSMUST00000195604 699 ntBASIC6.21□□□□□ -1.42
P20040 Gm43664-201ENSMUST00000196038 734 ntBASIC6.21□□□□□ -1.42
P20040 Gm42804-201ENSMUST00000199701 178 ntBASIC6.21□□□□□ -1.42
P20040 Gm44590-201ENSMUST00000206161 391 ntBASIC6.21□□□□□ -1.42
P20040 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC6.21□□□□□ -1.42
P20040 Gm45739-201ENSMUST00000213094 388 ntBASIC6.21□□□□□ -1.42
P20040 AC133598.2-201ENSMUST00000224302 624 ntBASIC6.21□□□□□ -1.42
P20040 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
P20040 Gm22504-201ENSMUST00000082963 139 ntBASIC6.21□□□□□ -1.42
P20040 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
P20040 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.21□□□□□ -1.42
P20040 Gm13106-201ENSMUST00000119045 1443 ntBASIC6.21□□□□□ -1.42
P20040 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
P20040 Gm43211-201ENSMUST00000196901 1899 ntBASIC6.21□□□□□ -1.42
P20040 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
P20040 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
P20040 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
P20040 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
P20040 Gm10388-201ENSMUST00000205001 2936 ntBASIC6.21□□□□□ -1.42
P20040 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
P20040 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
P20040 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
P20040 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC6.21□□□□□ -1.42
P20040 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
P20040 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC6.21□□□□□ -1.42
P20040 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
P20040 AC123705.1-201ENSMUST00000222512 2058 ntBASIC6.21□□□□□ -1.42
P20040 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
P20040 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
P20040 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
P20040 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
P20040 Gm44704-201ENSMUST00000208963 1990 ntBASIC6.2□□□□□ -1.42
P20040 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC6.2□□□□□ -1.42
P20040 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC6.2□□□□□ -1.42
P20040 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC6.2□□□□□ -1.42
P20040 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
P20040 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC6.2□□□□□ -1.42
P20040 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
P20040 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
P20040 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
P20040 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
P20040 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
P20040 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
P20040 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
P20040 Gm25757-201ENSMUST00000103986 123 ntBASIC6.2□□□□□ -1.42
P20040 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
P20040 Gm14279-201ENSMUST00000117142 332 ntBASIC6.2□□□□□ -1.42
P20040 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC6.2□□□□□ -1.42
P20040 Gm10243-201ENSMUST00000117571 333 ntBASIC6.2□□□□□ -1.42
P20040 Gm8916-201ENSMUST00000119732 949 ntBASIC6.2□□□□□ -1.42
P20040 Gm5135-201ENSMUST00000121100 573 ntBASIC6.2□□□□□ -1.42
P20040 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC6.2□□□□□ -1.42
P20040 Gm12518-201ENSMUST00000122075 779 ntBASIC6.2□□□□□ -1.42
P20040 Gm4887-201ENSMUST00000122230 1053 ntBASIC6.2□□□□□ -1.42
P20040 Gm22024-201ENSMUST00000122733 287 ntBASIC6.2□□□□□ -1.42
P20040 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC6.2□□□□□ -1.42
P20040 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC6.2□□□□□ -1.42
P20040 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
P20040 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC6.2□□□□□ -1.42
P20040 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
P20040 Gm23276-201ENSMUST00000157913 138 ntBASIC6.2□□□□□ -1.42
P20040 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
P20040 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC6.2□□□□□ -1.42
P20040 Gm24369-201ENSMUST00000175387 96 ntBASIC6.2□□□□□ -1.42
P20040 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC6.2□□□□□ -1.42
P20040 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC6.2□□□□□ -1.42
P20040 Mir7005-201ENSMUST00000185089 69 ntBASIC6.2□□□□□ -1.42
P20040 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
P20040 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
P20040 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
P20040 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
P20040 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC6.2□□□□□ -1.42
P20040 Gm7341-201ENSMUST00000192183 926 ntBASIC6.2□□□□□ -1.42
P20040 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC6.2□□□□□ -1.42
P20040 Gm29759-201ENSMUST00000205860 327 ntBASIC6.2□□□□□ -1.42
P20040 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC6.2□□□□□ -1.42
P20040 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC6.2□□□□□ -1.42
P20040 Gm19056-201ENSMUST00000218220 797 ntBASIC6.2□□□□□ -1.42
P20040 AC120002.1-201ENSMUST00000218456 331 ntBASIC6.2□□□□□ -1.42
P20040 AC132446.1-201ENSMUST00000222655 226 ntBASIC6.2□□□□□ -1.42
P20040 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC6.2□□□□□ -1.42
P20040 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
P20040 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
P20040 n-R5s60-201ENSMUST00000083299 119 ntBASIC6.2□□□□□ -1.42
P20040 Gm10247-201ENSMUST00000090395 333 ntBASIC6.2□□□□□ -1.42
P20040 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
P20040 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
P20040 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
P20040 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
P20040 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
P20040 Gm43606-201ENSMUST00000195938 3556 ntBASIC6.2□□□□□ -1.42
P20040 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
P20040 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
P20040 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
P20040 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
P20040 Gm37216-201ENSMUST00000193817 3478 ntBASIC6.2□□□□□ -1.42
P20040 Gm37891-201ENSMUST00000195585 1326 ntBASIC6.2□□□□□ -1.42
P20040 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms