Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Gm46424-201ENSMUST00000221567 168 ntBASIC7.61□□□□□ -1.19
Chmp6P0C0A3 AC187103.4-201ENSMUST00000225399 300 ntBASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Gm26575-201ENSMUST00000181714 2232 ntBASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC7.61□□□□□ -1.19
Chmp6P0C0A3 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Gm5084-202ENSMUST00000224064 3609 ntBASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Gm45250-201ENSMUST00000209414 3592 ntBASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Gm14762-201ENSMUST00000105109 1771 ntBASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Gm37611-201ENSMUST00000195250 2028 ntBASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Gm10307-201ENSMUST00000189839 1337 ntBASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Gm8421-201ENSMUST00000119439 305 ntBASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Gm9439-201ENSMUST00000119554 973 ntBASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Gm12920-201ENSMUST00000121818 1186 ntBASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Gm14251-201ENSMUST00000122133 279 ntBASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Gm24422-201ENSMUST00000157800 119 ntBASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Gm4613-201ENSMUST00000165488 276 ntBASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Gm22702-201ENSMUST00000175372 69 ntBASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Gm38373-201ENSMUST00000192042 288 ntBASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Gm37669-201ENSMUST00000192184 820 ntBASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Gm9419-201ENSMUST00000200672 567 ntBASIC7.6□□□□□ -1.19
Chmp6P0C0A3 AC154849.2-201ENSMUST00000223781 974 ntBASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC7.6□□□□□ -1.19
Chmp6P0C0A3 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Gm15950-201ENSMUST00000162902 1973 ntBASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Gm45201-201ENSMUST00000207187 2679 ntBASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Gm42653-201ENSMUST00000200644 2839 ntBASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 CT010470.1-201ENSMUST00000225364 1876 ntBASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Chmp6P0C0A3 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Gm36933-201ENSMUST00000194945 3071 ntBASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Chmp6P0C0A3 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Gm22671-201ENSMUST00000104420 134 ntBASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Gm13196-201ENSMUST00000118297 379 ntBASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Gm11338-201ENSMUST00000120086 1160 ntBASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Gm23018-201ENSMUST00000177928 109 ntBASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Gm37689-201ENSMUST00000193139 275 ntBASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Trbv9-201ENSMUST00000194494 290 ntBASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Gm17833-201ENSMUST00000197629 1065 ntBASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Gm43926-201ENSMUST00000203978 430 ntBASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Gm45100-201ENSMUST00000209153 391 ntBASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Gm7368-201ENSMUST00000213307 367 ntBASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Gm2398-201ENSMUST00000218347 883 ntBASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Gm17611-202ENSMUST00000220613 814 ntBASIC7.59□□□□□ -1.19
Chmp6P0C0A3 AV026068-219ENSMUST00000224148 933 ntBASIC7.59□□□□□ -1.19
Chmp6P0C0A3 CT009711.2-202ENSMUST00000224538 973 ntBASIC7.59□□□□□ -1.19
Chmp6P0C0A3 CT009556.4-201ENSMUST00000227092 200 ntBASIC7.59□□□□□ -1.19
Chmp6P0C0A3 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 133.4 ms