Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 CT030185.1-201ENSMUST00000222940 2289 ntBASIC5.64□□□□□ -1.51
Hmgb3O54879 AC139350.2-201ENSMUST00000226508 2331 ntBASIC5.64□□□□□ -1.51
Hmgb3O54879 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Hmgb3O54879 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Hmgb3O54879 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Hmgb3O54879 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Hmgb3O54879 AC124581.3-201ENSMUST00000224270 1624 ntBASIC5.64□□□□□ -1.51
Hmgb3O54879 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Hmgb3O54879 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Hmgb3O54879 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Hmgb3O54879 Olfr1497-202ENSMUST00000217384 1672 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Hmgb3O54879 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC5.64□□□□□ -1.51
Hmgb3O54879 Gm13930-201ENSMUST00000118569 368 ntBASIC5.64□□□□□ -1.51
Hmgb3O54879 Gm11928-201ENSMUST00000119323 437 ntBASIC5.64□□□□□ -1.51
Hmgb3O54879 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC5.64□□□□□ -1.51
Hmgb3O54879 Gm13940-201ENSMUST00000121023 301 ntBASIC5.64□□□□□ -1.51
Hmgb3O54879 Gm14251-201ENSMUST00000122133 279 ntBASIC5.64□□□□□ -1.51
Hmgb3O54879 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC5.64□□□□□ -1.51
Hmgb3O54879 Gm12594-201ENSMUST00000132140 499 ntTSL 3 BASIC5.64□□□□□ -1.51
Hmgb3O54879 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Hmgb3O54879 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
Hmgb3O54879 Gm4613-201ENSMUST00000165488 276 ntBASIC5.64□□□□□ -1.51
Hmgb3O54879 Gm17129-201ENSMUST00000168168 505 ntBASIC5.64□□□□□ -1.51
Hmgb3O54879 Arpp19-207ENSMUST00000169188 216 ntTSL 5 BASIC5.64□□□□□ -1.51
Hmgb3O54879 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Hmgb3O54879 Gm8696-201ENSMUST00000174777 385 ntBASIC5.64□□□□□ -1.51
Hmgb3O54879 Gm4252-201ENSMUST00000174823 313 ntBASIC5.64□□□□□ -1.51
Hmgb3O54879 Gm9399-201ENSMUST00000175771 639 ntBASIC5.64□□□□□ -1.51
Hmgb3O54879 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC5.64□□□□□ -1.51
Hmgb3O54879 Gm15251-201ENSMUST00000177947 883 ntBASIC5.64□□□□□ -1.51
Hmgb3O54879 Gm21430-201ENSMUST00000182998 998 ntBASIC5.64□□□□□ -1.51
Hmgb3O54879 1700025H01Rik-201ENSMUST00000187479 547 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Hmgb3O54879 Gm36667-201ENSMUST00000196125 753 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Hmgb3O54879 Gm42673-201ENSMUST00000202676 337 ntBASIC5.64□□□□□ -1.51
Hmgb3O54879 Gm7565-201ENSMUST00000203611 623 ntBASIC5.64□□□□□ -1.51
Hmgb3O54879 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Hmgb3O54879 Gm44943-201ENSMUST00000207254 300 ntBASIC5.64□□□□□ -1.51
Hmgb3O54879 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC5.64□□□□□ -1.51
Hmgb3O54879 Gm6909-201ENSMUST00000209825 989 ntBASIC5.64□□□□□ -1.51
Hmgb3O54879 Msra-204ENSMUST00000210363 1042 ntTSL 5 BASIC5.64□□□□□ -1.51
Hmgb3O54879 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Hmgb3O54879 AC132384.10-201ENSMUST00000217862 1204 ntBASIC5.64□□□□□ -1.51
Hmgb3O54879 AC122539.2-201ENSMUST00000220207 404 ntBASIC5.64□□□□□ -1.51
Hmgb3O54879 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC5.64□□□□□ -1.51
Hmgb3O54879 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Hmgb3O54879 Gm6807-201ENSMUST00000077435 888 ntBASIC5.64□□□□□ -1.51
Hmgb3O54879 Olfr641-201ENSMUST00000098183 939 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Hmgb3O54879 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Hmgb3O54879 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Hmgb3O54879 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC5.64□□□□□ -1.51
Hmgb3O54879 AC107763.1-202ENSMUST00000225021 2663 ntBASIC5.64□□□□□ -1.51
Hmgb3O54879 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Hmgb3O54879 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Hmgb3O54879 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC5.64□□□□□ -1.51
Hmgb3O54879 Cyp2c53-ps-202ENSMUST00000175960 1370 ntBASIC5.64□□□□□ -1.51
Hmgb3O54879 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Hmgb3O54879 Gm9585-201ENSMUST00000219681 1404 ntBASIC5.64□□□□□ -1.51
Hmgb3O54879 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Hmgb3O54879 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Hmgb3O54879 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hmgb3O54879 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hmgb3O54879 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
Hmgb3O54879 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Hmgb3O54879 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hmgb3O54879 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hmgb3O54879 Gm13929-201ENSMUST00000117553 1125 ntBASIC5.63□□□□□ -1.51
Hmgb3O54879 Gm14550-201ENSMUST00000117918 407 ntBASIC5.63□□□□□ -1.51
Hmgb3O54879 Gm11320-201ENSMUST00000119434 463 ntBASIC5.63□□□□□ -1.51
Hmgb3O54879 Gm16248-201ENSMUST00000124238 243 ntBASIC5.63□□□□□ -1.51
Hmgb3O54879 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hmgb3O54879 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC5.63□□□□□ -1.51
Hmgb3O54879 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC5.63□□□□□ -1.51
Hmgb3O54879 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC5.63□□□□□ -1.51
Hmgb3O54879 Gm13012-202ENSMUST00000155349 849 ntTSL 2 BASIC5.63□□□□□ -1.51
Hmgb3O54879 Gm14715-201ENSMUST00000156823 643 ntTSL 3 BASIC5.63□□□□□ -1.51
Hmgb3O54879 Olfr457-201ENSMUST00000170504 1039 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Hmgb3O54879 Gm5272-201ENSMUST00000182730 982 ntBASIC5.63□□□□□ -1.51
Hmgb3O54879 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC5.63□□□□□ -1.51
Hmgb3O54879 H2al1a-201ENSMUST00000188439 501 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Hmgb3O54879 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC5.63□□□□□ -1.51
Hmgb3O54879 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC5.63□□□□□ -1.51
Hmgb3O54879 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Hmgb3O54879 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC5.63□□□□□ -1.51
Hmgb3O54879 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC5.63□□□□□ -1.51
Hmgb3O54879 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC5.63□□□□□ -1.51
Hmgb3O54879 AC160931.1-201ENSMUST00000223298 413 ntTSL 3 BASIC5.63□□□□□ -1.51
Hmgb3O54879 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC5.63□□□□□ -1.51
Hmgb3O54879 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hmgb3O54879 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Hmgb3O54879 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hmgb3O54879 Gm37967-201ENSMUST00000195634 2665 ntBASIC5.63□□□□□ -1.51
Hmgb3O54879 Gm37078-201ENSMUST00000193314 2009 ntBASIC5.63□□□□□ -1.51
Hmgb3O54879 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hmgb3O54879 CT025639.1-201ENSMUST00000223906 1375 ntBASIC5.63□□□□□ -1.51
Hmgb3O54879 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hmgb3O54879 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
Hmgb3O54879 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hmgb3O54879 AC124183.1-201ENSMUST00000222367 2135 ntBASIC5.63□□□□□ -1.51
Hmgb3O54879 Gm37460-201ENSMUST00000191796 2249 ntBASIC5.63□□□□□ -1.51
Hmgb3O54879 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 167.8 ms