Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Scn3aA2ASI5 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Scn3aA2ASI5 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Scn3aA2ASI5 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC7.76□□□□□ -1.17
Scn3aA2ASI5 Gm13462-201ENSMUST00000121472 961 ntBASIC7.76□□□□□ -1.17
Scn3aA2ASI5 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Scn3aA2ASI5 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Scn3aA2ASI5 Gm29470-201ENSMUST00000188007 696 ntBASIC7.76□□□□□ -1.17
Scn3aA2ASI5 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC7.76□□□□□ -1.17
Scn3aA2ASI5 AL929555.1-201ENSMUST00000215283 509 ntBASIC7.76□□□□□ -1.17
Scn3aA2ASI5 AC154558.1-201ENSMUST00000222278 415 ntBASIC7.76□□□□□ -1.17
Scn3aA2ASI5 AC156790.1-201ENSMUST00000226572 559 ntBASIC7.76□□□□□ -1.17
Scn3aA2ASI5 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
Scn3aA2ASI5 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Scn3aA2ASI5 Gm8276-201ENSMUST00000192231 1812 ntBASIC7.76□□□□□ -1.17
Scn3aA2ASI5 Gm4962-201ENSMUST00000199640 2977 ntBASIC7.76□□□□□ -1.17
Scn3aA2ASI5 CT009757.6-201ENSMUST00000220661 2312 ntBASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Gm43618-201ENSMUST00000197392 3451 ntBASIC7.75□□□□□ -1.17
Scn3aA2ASI5 AC158986.1-201ENSMUST00000228391 3455 ntBASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Gm45407-201ENSMUST00000209499 3676 ntBASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Gm37647-201ENSMUST00000194556 3143 ntBASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Snord88a-201ENSMUST00000116723 90 ntBASIC7.75□□□□□ -1.17
Scn3aA2ASI5 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Gm20454-201ENSMUST00000172713 221 ntBASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Mir199b-201ENSMUST00000175066 110 ntBASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Gm8183-201ENSMUST00000183134 980 ntBASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Gm19175-201ENSMUST00000199895 916 ntBASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Gm5324-201ENSMUST00000208115 476 ntBASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Scn3aA2ASI5 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Gm9839-201ENSMUST00000195252 1437 ntBASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Scn3aA2ASI5 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Gm44194-201ENSMUST00000204222 3229 ntBASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Gm14613-201ENSMUST00000122239 752 ntBASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Gm3140-201ENSMUST00000163523 481 ntBASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 AC117240.1-201ENSMUST00000199436 61 ntBASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Gm8190-201ENSMUST00000199603 586 ntBASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Gm45394-201ENSMUST00000209240 1175 ntBASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Gm45899-201ENSMUST00000212196 1276 ntBASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 AC153557.1-201ENSMUST00000217697 403 ntBASIC7.74□□□□□ -1.17
Scn3aA2ASI5 AC124601.1-201ENSMUST00000220531 135 ntBASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Gm8607-201ENSMUST00000221864 431 ntBASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 n-R5s95-201ENSMUST00000082684 118 ntBASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Gm44704-201ENSMUST00000208963 1990 ntBASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 AC163660.4-201ENSMUST00000224983 2171 ntBASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Gm37648-201ENSMUST00000192072 2563 ntBASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Gm26144-201ENSMUST00000104475 132 ntBASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Gm14864-201ENSMUST00000116164 1087 ntBASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Gm13983-201ENSMUST00000118018 865 ntBASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Gm12369-201ENSMUST00000121343 942 ntBASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Gm8648-201ENSMUST00000122457 221 ntBASIC7.74□□□□□ -1.17
Scn3aA2ASI5 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Scn3aA2ASI5 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms