Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 CT030238.4-201ENSMUST00000228579 801 ntBASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Btn2a2-203ENSMUST00000110433 2370 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 AC149294.7-201ENSMUST00000227475 1432 ntBASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Wls-201ENSMUST00000068952 3559 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Bcat1-201ENSMUST00000032402 7833 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Cdc6-202ENSMUST00000093937 2559 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Sfmbt1-204ENSMUST00000227303 2960 ntBASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Gm15496-201ENSMUST00000129578 2456 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Olfr156-204ENSMUST00000215406 1850 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Gm15739-201ENSMUST00000118049 872 ntBASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Gm11558-201ENSMUST00000118454 459 ntBASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Gm11688-201ENSMUST00000122145 308 ntBASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Gm8164-201ENSMUST00000169120 1192 ntBASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Mir6340-201ENSMUST00000183857 119 ntBASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Gm27595-201ENSMUST00000184579 112 ntBASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Mir8095-201ENSMUST00000185103 129 ntBASIC9.37□□□□□ -0.91
Ube3bQ9ES34 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Gm17895-201ENSMUST00000194028 874 ntBASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Gm38019-201ENSMUST00000195133 380 ntBASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Gm7542-201ENSMUST00000201140 777 ntBASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Gm44727-201ENSMUST00000204225 451 ntBASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Gm7151-201ENSMUST00000211511 954 ntBASIC9.37□□□□□ -0.91
Ube3bQ9ES34 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 AC154806.1-202ENSMUST00000227949 885 ntBASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Gm5815-201ENSMUST00000050706 1185 ntBASIC9.37□□□□□ -0.91
Ube3bQ9ES34 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Rfxank-201ENSMUST00000075724 3609 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Slc2a3-201ENSMUST00000032476 3959 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Gm37159-201ENSMUST00000192720 3605 ntBASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Zfp407-202ENSMUST00000125763 7906 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Ube3bQ9ES34 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Rgs4-202ENSMUST00000111357 2575 ntTSL 5 BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Gm37121-201ENSMUST00000192219 2556 ntBASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Tmem43-201ENSMUST00000032183 2903 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Npy2r-203ENSMUST00000182181 1331 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Gm8107-201ENSMUST00000117477 2009 ntBASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Sestd1-201ENSMUST00000102659 2720 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Acp1-201ENSMUST00000062740 3066 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Gm43845-201ENSMUST00000202462 1820 ntBASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Gm13552-201ENSMUST00000118837 417 ntBASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Gm16463-201ENSMUST00000120527 721 ntBASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Gm16260-201ENSMUST00000155141 304 ntBASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Gm22847-201ENSMUST00000157707 105 ntBASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Gm24530-201ENSMUST00000157948 288 ntBASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms