Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm43147-201ENSMUST00000196944 542 ntBASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Gm43212-201ENSMUST00000198208 394 ntBASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Gm18593-201ENSMUST00000200754 1139 ntBASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Gm6581-201ENSMUST00000214545 260 ntBASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC6.59□□□□□ -1.36
Cdc40Q9DC48 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Cdc40Q9DC48 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Cdc40Q9DC48 Cmah-208ENSMUST00000224819 9482 ntBASIC6.59□□□□□ -1.36
Cdc40Q9DC48 Gm12346-201ENSMUST00000121455 2255 ntBASIC6.59□□□□□ -1.36
Cdc40Q9DC48 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
Cdc40Q9DC48 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Gm11342-203ENSMUST00000224879 1324 ntBASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Gm42820-201ENSMUST00000200084 3063 ntBASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cdc40Q9DC48 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Gm25344-201ENSMUST00000104503 132 ntBASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Gm13768-201ENSMUST00000116469 929 ntBASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Gm15484-201ENSMUST00000118871 828 ntBASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Gm13444-201ENSMUST00000119445 522 ntBASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Gm11338-201ENSMUST00000120086 1160 ntBASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Gm14787-201ENSMUST00000121236 388 ntBASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Gm15188-201ENSMUST00000121264 704 ntBASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Gm12920-201ENSMUST00000121818 1186 ntBASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Gm13776-201ENSMUST00000122236 1261 ntBASIC6.58□□□□□ -1.36
Cdc40Q9DC48 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Gm20637-201ENSMUST00000175715 462 ntBASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Gm18875-201ENSMUST00000188563 882 ntBASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Gm5050-201ENSMUST00000197164 775 ntBASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Igkv4-77-201ENSMUST00000199410 352 ntBASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Gm42734-201ENSMUST00000201656 878 ntBASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Gm45725-201ENSMUST00000212962 337 ntBASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Cdc40Q9DC48 AC152394.1-201ENSMUST00000227360 1086 ntBASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cdc40Q9DC48 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Gm37161-201ENSMUST00000191994 2697 ntBASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Gm29761-201ENSMUST00000215964 1939 ntBASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
Cdc40Q9DC48 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cdc40Q9DC48 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Gm37548-201ENSMUST00000194519 3814 ntBASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Gm37891-201ENSMUST00000195585 1326 ntBASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Gm42597-201ENSMUST00000196663 1544 ntBASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Gm15000-201ENSMUST00000118275 1243 ntBASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Gm13486-201ENSMUST00000119910 282 ntBASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Gm14531-201ENSMUST00000120845 285 ntBASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Gm22275-201ENSMUST00000122470 310 ntBASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Gm25178-201ENSMUST00000122633 325 ntBASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Gm25640-201ENSMUST00000175378 125 ntBASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Gm5272-201ENSMUST00000182730 982 ntBASIC6.57□□□□□ -1.36
Cdc40Q9DC48 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Gm20223-201ENSMUST00000199932 805 ntBASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Cdc40Q9DC48 CT009738.1-201ENSMUST00000219031 809 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms