Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Ddx56Q9D0R4 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC7.66□□□□□ -1.18
Ddx56Q9D0R4 Snora9-201ENSMUST00000082579 133 ntBASIC7.66□□□□□ -1.18
Ddx56Q9D0R4 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ddx56Q9D0R4 Gm11853-201ENSMUST00000119687 1384 ntBASIC7.66□□□□□ -1.18
Ddx56Q9D0R4 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ddx56Q9D0R4 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC7.66□□□□□ -1.18
Ddx56Q9D0R4 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Ddx56Q9D0R4 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ddx56Q9D0R4 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ddx56Q9D0R4 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ddx56Q9D0R4 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC7.66□□□□□ -1.18
Ddx56Q9D0R4 AC158982.1-205ENSMUST00000227339 1876 ntBASIC7.66□□□□□ -1.18
Ddx56Q9D0R4 AC159195.2-201ENSMUST00000223670 3757 ntBASIC7.66□□□□□ -1.18
Ddx56Q9D0R4 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC7.66□□□□□ -1.18
Ddx56Q9D0R4 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ddx56Q9D0R4 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ddx56Q9D0R4 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Ddx56Q9D0R4 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Gm6746-201ENSMUST00000108774 483 ntBASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Gm11383-201ENSMUST00000121346 807 ntBASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Gm2735-201ENSMUST00000136133 277 ntBASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Gm22948-201ENSMUST00000158561 243 ntBASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Gm22206-201ENSMUST00000158612 116 ntBASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Gm8305-201ENSMUST00000180022 1195 ntBASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Gm18709-201ENSMUST00000180564 489 ntBASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Mir8097-201ENSMUST00000185150 119 ntBASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Snhg17-209ENSMUST00000186993 3144 ntBASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Gm28952-201ENSMUST00000189285 681 ntBASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Gm37631-201ENSMUST00000192275 364 ntBASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Gm38264-201ENSMUST00000194850 2032 ntBASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Gm43181-201ENSMUST00000197001 2072 ntBASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Gm44253-201ENSMUST00000203387 628 ntBASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Gm34165-201ENSMUST00000222012 1174 ntBASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 AC169985.1-201ENSMUST00000223648 2439 ntBASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 AC139294.2-201ENSMUST00000227159 285 ntBASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 AC165154.2-201ENSMUST00000227310 336 ntBASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 AC125087.1-201ENSMUST00000227552 514 ntBASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Gm20900-201ENSMUST00000078729 472 ntBASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ddx56Q9D0R4 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC7.65□□□□□ -1.19
Ddx56Q9D0R4 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Ddx56Q9D0R4 Gm42820-201ENSMUST00000200084 3063 ntBASIC7.65□□□□□ -1.19
Ddx56Q9D0R4 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC7.65□□□□□ -1.19
Ddx56Q9D0R4 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Ddx56Q9D0R4 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.19
Ddx56Q9D0R4 Gm33167-201ENSMUST00000201933 2643 ntBASIC7.65□□□□□ -1.19
Ddx56Q9D0R4 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Gm8141-201ENSMUST00000190856 1723 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 CT025535.2-201ENSMUST00000228572 7441 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Gm37891-201ENSMUST00000195585 1326 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Gm9519-201ENSMUST00000206108 1337 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Gm11880-201ENSMUST00000117612 399 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Gm14248-201ENSMUST00000117790 544 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Gm8662-201ENSMUST00000118644 574 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Gm13038-201ENSMUST00000119886 459 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Gm11485-201ENSMUST00000120048 1175 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Gm26357-201ENSMUST00000158218 115 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Gm25432-201ENSMUST00000158284 66 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Gm23259-201ENSMUST00000158318 303 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Gm8323-201ENSMUST00000168436 1201 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Gm4904-201ENSMUST00000178243 1195 ntBASIC7.64□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms