Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm17212-201ENSMUST00000166666 259 ntBASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm19840-201ENSMUST00000169624 882 ntBASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm4956-202ENSMUST00000178869 672 ntBASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Mir6241-201ENSMUST00000184225 103 ntBASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm7412-201ENSMUST00000191692 605 ntBASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm18752-201ENSMUST00000192876 608 ntBASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Trbv27-201ENSMUST00000193711 277 ntBASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm2221-201ENSMUST00000209342 418 ntBASIC8.44□□□□□ -1.06
Brf1Q8CFK2 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm19238-201ENSMUST00000221936 1260 ntBASIC8.44□□□□□ -1.06
Brf1Q8CFK2 AC125019.1-201ENSMUST00000224809 908 ntBASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm19024-201ENSMUST00000194681 1319 ntBASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm44022-201ENSMUST00000203708 5429 ntBASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm43728-201ENSMUST00000198817 2622 ntBASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Gm43775-201ENSMUST00000201019 3395 ntBASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Mir760-201ENSMUST00000103257 119 ntBASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Gm26570-201ENSMUST00000180672 342 ntBASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Gm29747-201ENSMUST00000194764 585 ntBASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Gm44112-201ENSMUST00000204787 372 ntBASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Gm9240-201ENSMUST00000206527 742 ntBASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Gm45725-201ENSMUST00000212962 337 ntBASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Brf1Q8CFK2 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Gm43019-201ENSMUST00000196948 2863 ntBASIC8.43□□□□□ -1.06
Brf1Q8CFK2 Gm6101-201ENSMUST00000195384 1867 ntBASIC8.43□□□□□ -1.06
Brf1Q8CFK2 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Gm26419-201ENSMUST00000104272 133 ntBASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Gm12849-201ENSMUST00000120013 739 ntBASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Gm14728-201ENSMUST00000122196 492 ntBASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Gm13487-201ENSMUST00000122240 864 ntBASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Gm23276-201ENSMUST00000157913 138 ntBASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Mir1929-201ENSMUST00000158635 93 ntBASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Gm22702-201ENSMUST00000175372 69 ntBASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Ighv1-17-201ENSMUST00000194435 350 ntBASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Gm37676-201ENSMUST00000195496 507 ntBASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC8.42□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms