Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ccdc60Q8C4J0 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccdc60Q8C4J0 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Ccdc60Q8C4J0 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ccdc60Q8C4J0 Gm44231-201ENSMUST00000204106 4075 ntBASIC8.84□□□□□ -0.99
Ccdc60Q8C4J0 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Ccdc60Q8C4J0 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Ccdc60Q8C4J0 AC159264.1-202ENSMUST00000224856 3162 ntBASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Gm14802-201ENSMUST00000121944 1885 ntBASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Gm18451-201ENSMUST00000196759 1719 ntBASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Gm24869-201ENSMUST00000104072 128 ntBASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Gm23891-201ENSMUST00000158114 138 ntBASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Gm22533-201ENSMUST00000158821 274 ntBASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Gm8715-201ENSMUST00000162728 531 ntBASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 AC154806.5-204ENSMUST00000228900 867 ntBASIC8.83□□□□□ -1
Ccdc60Q8C4J0 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Gm18701-201ENSMUST00000188281 1536 ntBASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 AC124572.1-201ENSMUST00000218155 2406 ntBASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Gm18259-201ENSMUST00000220991 2010 ntBASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc60Q8C4J0 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm21036-201ENSMUST00000207544 2611 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm44895-201ENSMUST00000206670 1538 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm25593-201ENSMUST00000102272 96 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm13735-201ENSMUST00000120217 670 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm7599-201ENSMUST00000121453 796 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm24680-201ENSMUST00000158759 126 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm17217-201ENSMUST00000166613 469 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm24157-201ENSMUST00000175265 111 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm29048-201ENSMUST00000185342 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm29403-201ENSMUST00000185491 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm28234-201ENSMUST00000185657 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm28248-201ENSMUST00000186093 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm29633-202ENSMUST00000186217 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm28829-201ENSMUST00000186231 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm28261-201ENSMUST00000186417 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm28815-201ENSMUST00000186751 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm28608-201ENSMUST00000186860 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm28122-201ENSMUST00000187088 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm28420-201ENSMUST00000187340 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm28106-201ENSMUST00000187640 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm28698-201ENSMUST00000187734 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm29224-201ENSMUST00000187965 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm29470-201ENSMUST00000188007 696 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm29189-201ENSMUST00000188018 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm29383-201ENSMUST00000188284 480 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm29476-201ENSMUST00000188397 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm29505-201ENSMUST00000188424 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm28125-201ENSMUST00000188470 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm29391-201ENSMUST00000188545 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm29280-201ENSMUST00000188571 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm28349-201ENSMUST00000188590 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm29652-201ENSMUST00000188622 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm28819-206ENSMUST00000188816 615 ntBASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms