Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm24869-201ENSMUST00000104072 128 ntBASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Gm14126-201ENSMUST00000122345 395 ntBASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Gm16284-201ENSMUST00000140995 400 ntBASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Gm24442-201ENSMUST00000157238 327 ntBASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Gm7420-201ENSMUST00000162836 842 ntBASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Gm26570-201ENSMUST00000180672 342 ntBASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Gm17786-201ENSMUST00000182000 427 ntBASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Mir6921-201ENSMUST00000183719 80 ntBASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Gm29369-201ENSMUST00000190674 615 ntBASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Gm37310-201ENSMUST00000195237 2968 ntBASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Gm34144-201ENSMUST00000197039 259 ntBASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Gm8924-201ENSMUST00000197405 1132 ntBASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Gm21040-201ENSMUST00000199493 1132 ntBASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Gm44112-201ENSMUST00000204787 372 ntBASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 AC125405.2-201ENSMUST00000227862 383 ntBASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Gm9030-201ENSMUST00000218405 2410 ntBASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Gm9029-201ENSMUST00000219232 2410 ntBASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Gm10855-201ENSMUST00000100426 2541 ntBASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Gm42597-201ENSMUST00000196663 1544 ntBASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Gm6181-201ENSMUST00000117187 264 ntBASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Gm13486-201ENSMUST00000119910 282 ntBASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Gm15158-201ENSMUST00000120577 570 ntBASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Gm8215-201ENSMUST00000120627 990 ntBASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Mir1930-201ENSMUST00000158799 84 ntBASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Usp49Q6P9L4 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Gm44661-201ENSMUST00000208830 3503 ntBASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Gm45174-201ENSMUST00000208884 3065 ntBASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Gm9604-201ENSMUST00000211175 433 ntBASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC7.82□□□□□ -1.16
Usp49Q6P9L4 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Gm10108-201ENSMUST00000078246 319 ntBASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Gm22053-201ENSMUST00000083394 200 ntBASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp49Q6P9L4 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Gm37274-201ENSMUST00000192167 1682 ntBASIC7.82□□□□□ -1.16
Usp49Q6P9L4 AC183268.1-201ENSMUST00000215753 2837 ntBASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Gm44289-201ENSMUST00000204144 1390 ntBASIC7.82□□□□□ -1.16
Usp49Q6P9L4 CT025566.1-202ENSMUST00000224800 2511 ntBASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp49Q6P9L4 Mbnl2-203ENSMUST00000226800 3328 ntBASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
Usp49Q6P9L4 AC122769.1-201ENSMUST00000226930 1714 ntBASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Gm7961-201ENSMUST00000201338 1436 ntBASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Mir760-201ENSMUST00000103257 119 ntBASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Gm25757-201ENSMUST00000103986 123 ntBASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Gm15096-201ENSMUST00000121918 878 ntBASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Gm23891-201ENSMUST00000158114 138 ntBASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Gm23762-201ENSMUST00000158348 106 ntBASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Gm16297-201ENSMUST00000161466 459 ntBASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Gm26179-201ENSMUST00000177723 132 ntBASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC7.81□□□□□ -1.16
Usp49Q6P9L4 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Gm18430-201ENSMUST00000197534 682 ntBASIC7.81□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms